Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01708 ATGGCTAGCCTCAAGGTTGCATGTGTGGTTGCTTTGATGTGCATGGTTGTGGCAGTGAGTGCTGCATCCATGGCACAGGCTGCGATCACGTGCGGGCAGGTCGCCGGCGACATCTCTCCGTGCCTCAGTTATCTTCGGAGCGGCGGAGTACCGCTGACGGCCTGCTGCAACGGAGTGAGGTCCCTCAACGGCGCGGCCCAGACCACCGCGGACCGCCAGGCTGCGTGCAACTGCCTGAAAAGCCTTGCCAATAATATGGGTGGGAGTTTGAATGCCAATAACGCAGCTTCTCTCCCAGGCAAATGTGGCGTCAACATCCCCTACAAGATCAGCACCTCCACCAACTGCGCCACCATCAAGTTCTGA 366 0.5874 MASLKVACVVALMCMVVAVSAASMAQAAITCGQVAGDISPCLSYLRSGGVPLTACCNGVRSLNGAAQTTADRQAACNCLKSLANNMGGSLNANNAASLPGKCGVNIPYKISTSTNCATIKF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01708 121 SMART aai_6 31 116 IPR016140 -
Pumo7g01708 121 ProSitePatterns Plant lipid transfer proteins signature. 98 119 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 5 117 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 Gene3D - 28 121 IPR036312 -
Pumo7g01708 121 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 PRINTS Plant phospholipid transfer protein signature 107 118 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Pumo7g01708 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 118 IPR036312 -
Pumo7g01708 121 CDD nsLTP1 29 116 - -
Pumo7g01708 121 FunFam Non-specific lipid-transfer protein 28 120 - -
Pumo7g01708 121 Pfam Probable lipid transfer 13 109 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01708 Pumo-Chr7 45133681 45135593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01708 12 120 Acyl Lipid Metabolism Gene Families AT5G59310 58.716 6.88e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01708 - - gmx:100817318 186.422