Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01540 ATGGTCGGAAAAACCATGTCCATGGCGGCGACTTCCCGCGAAAAGCTGGCGAGTCTGGTGAACGGTGCGAAGTTGGGCATCGACATCCCCTCGAAGCTGGAATCGCTGCGCCAACTCCGCCACGAACTTCCCCAAGAGGACCCCGTCCTCCTCACCGAGTTCCTCCCTTCACTCTGCCTCTTCCACTCCGATCGCTTCGGCCCCGTTCGCAAATTCGTCACCGAGATGCTTGGTGAGATTGGATTGAAGAACACGGAGTTCTTGTCAGACATTGTGCCTGTGCTGATTGAGGTTTTGGATGACGACACACCAGCGGTCATTCGGCAAGCTCTACTGTGCGGAATTGACTTGTTTCGTGCCACGCTTGAGAAAATTGCGGTTCAGGGTCTATATTCCAGTGATTTAGACGGTGCACTTGAATCAGCTTGGGCATGGATGCTTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGGGAGTGGTGGCGCAAAGCTGCTGGCACTGAAGTTTGTTGAGGCAGTTATTCGTCTTTACACTCCTGATCCCAATGGTTCCTCAGAGCCCACTTCTCATCAAGGAAGGCCTGTGGAATTTAATATATCATGGCTCAGGCGGGGTCATCCTGTACTTAACATTGGAGATTTGTCAATTGAAGCCAGCCATCGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCAACTGTGAAGTCCCTTAGTAACTCAGTAATCATTGTGCTGATTAAAAGTCTTTCAGCCATTGCAATTGACAGGCCTGCATTCTATGGCCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCTTCCAGCTCCGTTGTTAATGGGGTCTGTGTATCAGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACTTGCTCGAAATGTTTACATCCAAGTGCTGCTCCGTGGAGAGACCGTTTGGCAGGGGCATTGAAGGAAATGCAGTCAGAAGGAAAGGCAGATCGGGTGTTTCACGTAATCTCTGCTAGTAATGGAAGCATAGAGAGAGAGAAGGATGATCAACCTGTTATCAAGGAAGAGGAACCTGCAATAAATTCTGGTGATTCAGTGCACAATAATTTGGCAAGAAAACGATCGGGATCACAAATTGGAGGTGATTTAGCTGAAGATGAAGATGTACCTGGAAAACGTGTCAGGACAACTATTGTTGCTTTGGAAGAACCTAAGGAGTTAGATGAATATACCAGTGCCAACTCTCAGGATGAGACTCCTTCAACTGTACCAACATCTTTAAAAGAAGATGTGGATAATGGGCCTGTACGGCAACTTGTTGCTACGTTTGGTGCTTTGATTGCTCAAGGTGAAAAAGCTGTTGGACATTTGGAAATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCAAAACCTTCCTCTGAATTACCCTAATGCTGAAGGAAATGAACAGCTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTTGCTTGTGTTATGTCACTTTCTAGTACTTTCCCGCCAATAGCTTCCCTTCTTGATGCACATCAATCAGTGTCCAATGAGGTAAAGTCACAAGTGGAGGAAGAAATTTCTGCAACTGCTGCAAATAGTGGTGCTGTGCATTCTGCCATGAATATTGAATCTGAAAATATACCATCACCTATTGATATTCCATCTTCTGATGCCAGTATACCTGGAGTAGAGAATGGCTGCACAACTATGCATCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGTAGTGATGCTTTGTCGCAAACTTATGCTCCTTCCTTATTGGCTTCCACTGAAATATGCCCAGAAGATGGCAGTCAAGAGCAAGATACAAGTTTGGATCAGAGGTCACCTCTGAACTTAGCTCCATCAATATCAACAGATAGATCTGAGGAGCTGAGCCCAAAAGCGGCTGTTAGAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTGCCTCCCCGATTAGTCTTGCCAAAGATGATTGCTCCTGTTGTTGACCTTGATGATGAACAAATGGATCAATTGCAAAAGTCATGTTTTATGCGCATTATTGATGCATATAAGCAAATAGCTGTAGCTGGAGGCTCCAAAGTTCGTTTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCCTTGGAATTAGACCCATGGAAACTATTACAGAAGCATATTTTGATTGATTACACTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAAAATTCCTCCTGACAGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTCTGAAAATTTTAGAAAACATGTGTTCTCCTGGAAATGGGGATAAAGGTGAAAAGGAGTTGCACTCACTGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCTATTCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCAATACGTCTGGTGGCAAATAAGCTTTTTCCTTTGTCATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAATACTTTTCTCAGCGATGAGTGGGGATGCATCTGAAGCTACTGATGTTGAAGGTTCCATTACTGATTCACAAAAGGGACCTGATGTTGAAAAGGTTCCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCCCCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAATTTCCGAGGCTCAGAGGTGCATGTCATTGTATTTTGCTTTGTGTACAAAGAAACATTCTCTCTTTCGCCAAATATTTGTCATCTATAGAAGCACATCAAAGGCAGTGAAGCAGGCAGTGCATCGCCAAATTCCAATACTAGTACGTACTATGGGCTCATCTTCAGATCTCCTTGAAATTATTTCAGATCCCCCAAATGGAAGCGAGAATCTTCTAATGCAGGTATTGCAAACACTTACAGATGGTACGGTCCCTTCGAAGGATTTAATATGTACTGTGAAAAGGTTGCATGATTCAAGGCTCAAGGATGCAGAGGTTCTTATTCCGATATTACCATTCCTATCGAATGATGAGGTAATGCCCATTTTTCCTCATATTGTGAATCTTCCTTTGGAGAAGTTCCAAGCAGCACTTGGGCGCTTATTACAGGGATCATCACAATCTGGTCCGGTGCTTACTCCAGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAGGGACAGAATTCCCTTGAAAAAGGTCACAGACGCATGCAATGCTTGCTTTGAGCAGCGGCAAACTTTTACTCAAGAAGTTCTTGCCAGAGTTTTGAATCAGTTGGTTGAGCAGATTCCTCCTCCTTTACTGTTCATGCGCACAGTATTACAAGCAATTGGTGTTTTTCCAACACTGGTGGAATTTATAATGGGGATTCTTTCTCGCCTTGTGACAAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGTTGACAAAACCACAGTCATTTGGCATTTTGCTTCAGCTGCCTCCAGCACAATTGGAAAATGCATTAAATAGAAATGCAGCCTTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTAAACTTCCAAGGGCTATGCTGGTTGTTCTGGGACTTGCTTCAGATTCTCAGGTTTCAAGTCAAGCACAGACAAGTCAGACACAGACTACTACTCAGACACAAACTAGTCAAACACAGACTACTCAGACACTAACTAGTCAGACACAGACTGGTGAGACAAGCAACTCTGACAAGGACACAGCGACCGAAAAATCTAAAGAATCGTCTACAGCGAGCTAA 4083 0.4355 MVGKTMSMAATSREKLASLVNGAKLGIDIPSKLESLRQLRHELPQEDPVLLTEFLPSLCLFHSDRFGPVRKFVTEMLGEIGLKNTEFLSDIVPVLIEVLDDDTPAVIRQALLCGIDLFRATLEKIAVQGLYSSDLDGALESAWAWMLKFKDKVYSIAFQHGSGGAKLLALKFVEAVIRLYTPDPNGSSEPTSHQGRPVEFNISWLRRGHPVLNIGDLSIEASHRLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFYGRILPVLLSLEPSSSVVNGVCVSAAHLALKNAFLTCSKCLHPSAAPWRDRLAGALKEMQSEGKADRVFHVISASNGSIEREKDDQPVIKEEEPAINSGDSVHNNLARKRSGSQIGGDLAEDEDVPGKRVRTTIVALEEPKELDEYTSANSQDETPSTVPTSLKEDVDNGPVRQLVATFGALIAQGEKAVGHLEILISSISADLLAEVVMANMQNLPLNYPNAEGNEQLQDISMIGSDDKAKYPPSFVACVMSLSSTFPPIASLLDAHQSVSNEVKSQVEEEISATAANSGAVHSAMNIESENIPSPIDIPSSDASIPGVENGCTTMHPDIHDVGNSESGIPGLDSFGRSDALSQTYAPSLLASTEICPEDGSQEQDTSLDQRSPLNLAPSISTDRSEELSPKAAVRDVNSLVSSTATSVVLPPRLVLPKMIAPVVDLDDEQMDQLQKSCFMRIIDAYKQIAVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEKFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKGEKELHSLNADRVTQGLSAVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLFPLSSISQQIEDFAKEILFSAMSGDASEATDVEGSITDSQKGPDVEKVPNEQSSLSGSTKDVPSDNRQSCTSESVSPDSISEAQRCMSLYFALCTKKHSLFRQIFVIYRSTSKAVKQAVHRQIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLQTLTDGTVPSKDLICTVKRLHDSRLKDAEVLIPILPFLSNDEVMPIFPHIVNLPLEKFQAALGRLLQGSSQSGPVLTPAEVLIAIHGIDPERDRIPLKKVTDACNACFEQRQTFTQEVLARVLNQLVEQIPPPLLFMRTVLQAIGVFPTLVEFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPPAQLENALNRNAALKAPLIAHASQPDIQSKLPRAMLVVLGLASDSQVSSQAQTSQTQTTTQTQTSQTQTTQTLTSQTQTGETSNSDKDTATEKSKESSTAS 1360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 938 986 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 355 386 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 1311 1344 - -
Pumo7g01540 1360 Pfam Symplekin/PTA1 N-terminal 104 322 IPR032460 -
Pumo7g01540 1360 SUPERFAMILY ARM repeat 35 1198 IPR016024 -
Pumo7g01540 1360 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 7 1327 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 411 426 - -
Pumo7g01540 1360 Pfam Symplekin tight junction protein C terminal 1091 1269 IPR022075 -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 1311 1360 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 955 986 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 399 428 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 632 665 - -
Pumo7g01540 1360 MobiDBLite consensus disorder prediction 632 660 - -
Pumo7g01540 1360 Gene3D - 2 348 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01540 Pumo-Chr7 39220326 39235753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01540 K06100 - gmx:100779360 2373.2