Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01519 ATGGCCGTCGTTGGTGTCCTCGCGTTACAAGGATCTTTCAACGAGCACATAGCTGCTCTTAGAAGGTTAGGGGTGAAAGGCGTGGAGATTCGAAAGCCAGAGCAACTTCTCACCATTGGTTCCCTTATCATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGTTTCCTGCTTTGCGAGAGTTTGTACAATTGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCTTGGCAAATAAAGCTATAGGACAAAAGACTGGTGGACAGCATTTGGTTGGTGGACTTGATTGTACAGTGCATAGAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAGGCAGAGCTTCTAGTGCCAGAGCTCGCTTCCAAAGAAGGAGGTCCTGAAACGTTTCGTGGAGTTTTTATTCGTGCCCCTGCAATTCTTGAAGCAGGGCCAGAAGTTCAAGTGCTGGCTGATTATCCTGTACCTTCTAGCAGATTGTTGAGTTCTGATTCCTCTATTGAAGACAAAACGGAGAATGCTGAGGAAGAAAGTAAAGTTATAGTTGCTGTGAGACAAGGGAACATACTAGCAACTGCTTTCCATCCTGAATTGACAGCTGATACTCGATGGCATAGTTATTTCGTAAAAATGTCAAATGAGATTGGAGAAGAGGCCTCCTCAAGTAGCCTTGTTCCTGCACAAGCCAGCACAAGTCACTGTCAACAGCCCGACCTTCCTATCTTTCAATAG 756 0.4616 MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLTIGSLIIPGGESTTMAKLAEYHNLFPALREFVQLGKPVWGTCAGLIFLANKAIGQKTGGQHLVGGLDCTVHRNFFGSQIQSFEAELLVPELASKEGGPETFRGVFIRAPAILEAGPEVQVLADYPVPSSRLLSSDSSIEDKTENAEEESKVIVAVRQGNILATAFHPELTADTRWHSYFVKMSNEIGEEASSSSLVPAQASTSHCQQPDLPIFQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01519 251 NCBIfam pyridoxal 5'-phosphate synthase glutaminase subunit PdxT 4 161 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 PIRSF Glut_amidoT_SNO 1 224 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 Gene3D - 1 230 IPR029062 -
Pumo7g01519 251 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 1 223 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 CDD GATase1_PB 4 217 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 Pfam SNO glutamine amidotransferase family 6 220 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 3 229 - -
Pumo7g01519 251 MobiDBLite consensus disorder prediction 228 251 - -
Pumo7g01519 251 SUPERFAMILY Class I glutamine amidotransferase-like 3 219 IPR029062 -
Pumo7g01519 251 ProSitePatterns PdxT/SNO family family signature. 41 51 IPR021196 -
Pumo7g01519 251 FunFam Predicted protein 1 230 - -
Pumo7g01519 251 ProSiteProfiles PdxT/SNO family profile. 3 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Pumo7g01519 251 Hamap Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01519 Pumo-Chr7 38647009 38652748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01519 K08681 - gmx:100786227 448.743