Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01323 ATGTCAACAACAAAGTTTGGAAGATTGGTCTCTTTGGTTTCCAAGAGGGGATTTTCCACCTCCACCAGTGTTCAAAAGGGTGGTTCTGAGGAAGGTTTGAAATCATTGAACCTCTGTTCTGCAATCAATCAGGCTCTCCACATTGCCTTGGACACTGATCCCCGTTCTTATGTTTTTGGAGAGGATGTAAGCTTTGGTGGGGTCTTCCGTTGCACAACTGGATTAGCAGACCAATTTGGTAAAAAGAGGGTTTTCAATACTCCTCTATGTGAGCAGGGTATCGTCGGTTTTGGCATTGGTCTAGCAGCTATGGGAAATCGAGCCATAGCAGAAATCCAGTTTGCAGATTACATTTTCCCTGCTTTTGACCAGATTGTCAATGAAGCTGCTAAATTCAGATACCGGAGTGGGAACCAATTTAATTGTGGTGGTTTAACGGTTAGAGCCCCTTATGGAGCTGTGGGCCATGGTGGGCATTACCACTCTCAGTCCCCTGAGGCTTTCTTCTGTCATGTTCCTGGTATCAAAGTGGTCATCCCTCGAAGTCCACGACAAGCAAAAGGCTTGTTGCTGTCTTGCATACGAGATCCAAATCCTATAGTATTTTTTGAACCGAAGTGGCTTTATCGTTTGGCTGTTGAAGAAGTACCGGAGGATGATTACATGCTGCCCTTATCTGAGGCTGAGGTAATTCGGCAAGGAAGTGATATAACACTTGTTGGATGGGGAGCTCAATTATCTATAATGGAACAAGCTTGTCTTGATGCAGAAAAAGAGGGAATTTCTTGTGAATTGATTGATCTGAAGACACTAATTCCTTGGGATAAGGAAACAGTAGAGGCCTCAGTTAATAAGACAGGAAGATTGCTTGTTAGTCATGAAGCTCCTATAACTGGAGGTTTTGGTGCTGAAATCTCAGCTTCCATTGTTGAGCGTTGCTTCTCAAGGTTAGAGGCCCCTGTAGCAAGAATTTGTGGTCTGGACACTCCTTTTCCTTTGGTTTTTGAACCTTTCTACATGCCAACCAAAAATAAGATATTGGATGCAATTAAATCAACTATGAACTACTAA 1071 0.4314 MSTTKFGRLVSLVSKRGFSTSTSVQKGGSEEGLKSLNLCSAINQALHIALDTDPRSYVFGEDVSFGGVFRCTTGLADQFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPRQAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEDDYMLPLSEAEVIRQGSDITLVGWGAQLSIMEQACLDAEKEGISCELIDLKTLIPWDKETVEASVNKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARICGLDTPFPLVFEPFYMPTKNKILDAIKSTMNY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01323 356 CDD TPP_PYR_E1-PDHc-beta_like 41 206 - -
Pumo7g01323 356 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 33 218 IPR029061 -
Pumo7g01323 356 Gene3D - 225 356 IPR009014 GO:0003824
Pumo7g01323 356 Pfam Transketolase, C-terminal domain 227 346 IPR033248 -
Pumo7g01323 356 SUPERFAMILY TK C-terminal domain-like 220 356 IPR009014 GO:0003824
Pumo7g01323 356 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED 29 356 - -
Pumo7g01323 356 Pfam Transketolase, pyrimidine binding domain 37 210 IPR005475 -
Pumo7g01323 356 FunFam Pyruvate dehydrogenase E1 beta subunit 33 224 - -
Pumo7g01323 356 Gene3D - 33 224 - -
Pumo7g01323 356 SMART Transket_pyr_3 36 211 IPR005475 -
Pumo7g01323 356 FunFam 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial 225 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01323 Pumo-Chr7 32681909 32688479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01323 19 356 Acyl Lipid Metabolism Gene Families AT1G55510 88.166 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01323 K00167 - gmx:100802853 705.286