Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00980 ATGGCAGATAAGCACAAACACAATGATAATAACGAGCTTCAACCACTCCTTGTGCTTGGTCCTCCATTAGTATTCCCAACCTTTGAAGCTCAAAACTTTCACAACTACTGTTTTCTCAAAGCTTTCTCCTCACAACTCCCGCTCCACCAATTCCTCACTGAGCAAAATGTTGACCCTTCATCCATTCAAGCCATACTCTGTAACCCTCACCAGAAGGTTTCTGCAGATGACATCCGGCTCCTCCCATCACTCGTCATCATTGTGACCACCAGTGCTGGAACTGACCACATAGACTTGGCTGAGTGCAGCCACCGTAGTATTCAGGTTATCTCTATTGCCAGAGATCACGCCGAGGATGTTGCTGACTTGGCTGTGGGCTTGTTGATTGATGTAATGTGGAAAATTTCTGCCACTGATCGACATGTTAGGAAATGGGGTCCTTCTATGCCCTTGAATCTTTCTTTTGGTTCCAAGCTAGAAGGCAAGCGAGTAGGCATTGTTGGATAG 507 0.4615 MADKHKHNDNNELQPLLVLGPPLVFPTFEAQNFHNYCFLKAFSSQLPLHQFLTEQNVDPSSIQAILCNPHQKVSADDIRLLPSLVIIVTTSAGTDHIDLAECSHRSIQVISIARDHAEDVADLAVGLLIDVMWKISATDRHVRKWGPSMPLNLSFGSKLEGKRVGIVG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00980 168 Gene3D - 117 168 - -
Pumo7g00980 168 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 61 144 - -
Pumo7g00980 168 Gene3D - 59 116 - -
Pumo7g00980 168 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 17 168 - -
Pumo7g00980 168 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 60 136 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00980 Pumo-Chr7 18008074 18014401 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00980 - K15919 gmx:100812243 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00980 7 18008074 18014401 Pumo7g00980 7 18008074 18014401 ECH