Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00978 ATGCAACTCTCAGAGAAGCAGAAGGCTCAGAGAAAGATTGGAGAACATTGTGGCTATGCTAATAGCTTCATTGGAAGATTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTACTCTGCAGATAAATCAATCAAAACTGTGGAGGACTATTTTCTAAATGTCATGGGGGAAGATTTCAGGCAATTTGGGAGTGTGTTCCAAGAATATTGTGAAGCCATGAGCAATCTCTCTCTTGGGATTATGGAGCTTCTGGGGATGAGCCTAGGAGTTGGCAGGGAATGTTTCAGAGATTTCTTCGAAGGAAATGAGTCGGTTATGAGGTTGAATTACTACCCACCATGCCAAAAACCTGAGTTAGCTTTAGGAACTGGACCTCATTGTGACCCTACATCCCTAACCATTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTTGTTGATGGAAGATGGTACTCTGTCGCTCCAAAAGAAGATGCTTTCGTTGTCAATATTGGCGACACATTTATGGCTCTATCGAATGGGATTTTCAGGAGTTGCTTGCATAGAGCAGTTGTAAACAGCAAAATTGTGAGAAAATCACTTGCTTTCTTCCTATGTCCAAATAGAGACAAAGTGGTCACTCCTCCAAAGGATCTAATTAGCATCGAGAAACCAAGAACATATCCAGATTTCACATGGCCAAGTCTTCTTGAATTTACACAGAAACACTACAGGTCTGACACAAAAACACTTGATGCTTTCTCGAGGTGGCTACTACAGAAAAACAACTGA 783 0.4202 MQLSEKQKAQRKIGEHCGYANSFIGRFSSKLPWKETLSFHYSADKSIKTVEDYFLNVMGEDFRQFGSVFQEYCEAMSNLSLGIMELLGMSLGVGRECFRDFFEGNESVMRLNYYPPCQKPELALGTGPHCDPTSLTILHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALSNGIFRSCLHRAVVNSKIVRKSLAFFLCPNRDKVVTPPKDLISIEKPRTYPDFTWPSLLEFTQKHYRSDTKTLDAFSRWLLQKNN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00978 260 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 104 204 IPR005123 -
Pumo7g00978 260 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 233 - -
Pumo7g00978 260 FunFam Gibberellin 20 oxidase 2 1 242 - -
Pumo7g00978 260 Pfam 2OG-Fe(II) oxygenase superfamily 106 204 IPR044861 -
Pumo7g00978 260 Gene3D - 1 243 IPR027443 -
Pumo7g00978 260 SUPERFAMILY Clavaminate synthase-like 3 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00978 Pumo-Chr7 17988981 17990704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00978 71 252 Glycosyltransferase AT5G59530 34.595 6.70e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00978 K05282 - gmx:100775693 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00978 7 17988981 17990704 Pumo7g00978 7 17988981 17990704 ECH