Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00974 ATGGGTTCCGAAGCGAACGGCACGGAAATTCACAATCCAACACACATACAAACACAACAACAACATAGTAATCCTAATATTGCTTCACCCGAAAATCACGCTAAAAACGGCTACGAACCCGTCATCACTTCCCATTATGGCGGTGACGACGCCGAGAGTGACAGGCAAGTAACGCTAGTCCACCCTCATTCCCTTCTCCCCATTCCCGTGCCACCGCAGAGTTTCAAAGTAACCGAAAACGACGCCGTTTCGTCGAACGACTCGAACTTCTCCGTCGGAAGCTTCCTCCGCCAGCGGAGCAGCGACCTCTCCGCCGCGATCGTAAAGCGCGTCTCGTCTCTCCGACAATCCATCGAAGACAACAACGACGACGAGGAAGAAGAAAATCGTGAAGTGACGGAGTTCAACCTCTCCGGCGTCAAGGTCGTGGTGACGATGAAGCACGCTGAGGAGCCTTCCATCAAAGGACGCATCAGCTTCTTCTCGAAATCGAATTGCAGAGACTGCACCGCGGTGAGAAGATTCTTCAAAGAGAAAGGAATAAAATACGTTGAGATAAACGTCGACGTTTTCGGCGAGAGAGAGAAGGAGCTGCGAGAGCGAACGGGGAGCGCTTCGGTGCCGCAGATTTTCTTCAACGAGAAGCTGATCGGAGGGCTGGTGGCGCTGAACTCGCTGCGGAACAGCGGGGAGTTCGACCGGAGAGTGGCGGAGATGGTCGCCGGGAAGGCTGCCGGCGACGACGGGCCGGCGCCGCCGGCGTACGGGTTCGATTGCGTGGAGGAGGAGCGCGCGGACGAGATGGTCGGAGTGGTTAGGGTTTTGCGGCAGAGGTTGCCGATTCAGGACCGGTTGAGGAGGATGAAGATGGTGAAGAACTGCTTCGAAGGGAACGAGTTGGTGGAGGCGCTGACTCAGCACTTCCACTGCGCGCGTGACGAGGCCGTTGAGATCGGGAAGCAATTATCCAGGAAGCATTTCATCCATCATGTTTTCGGGGAAAATGATTTTGAGGAGGGGAATCACTTATATCGTTTCCTTGAGCATGAACCCTATATCCCCAGATGCTTTAATTTTCGTGGTACCACAAATGATAGTGAACCAAAGACTGCAGCTGCAATATGCACGAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTATGCTTCTGATGATAGGCAACATGTTGATTATGAGGCCATTAGCAAAAGTGAAGAATTTCGTAGGTATGTAAATTTGACTCAGGATCTGCAGCGAGTGAATCTCTTGGAACTATCAGAAAACGAGAAGCTTGCCTGCTTCTTAAATTTATATAATGCCATGGTCATCCATGCTGTTATTAGCGTAGGGTGTCCAGAAGGTGTAATTGATAGGAGATCCTTCTATAGTGATTTCCAGTATTTGGTTGGAGGGCATCCTTATTCTCTTAATATAATTAAAAATGGTATCCTCAGATGCAATCGGAGGTCACCATATTCCTTAGTAAAGCCCTTTAGCACAGGAGACAAGCGGTTAGAGGTTGCTCTTATCAAGTTGAATCCGTTATTGCATTTTGGACTTTGTAATGGTACAAAGTCCAGCCCAAGGGTTAGGTTCTTCTCACCACATAGAGTTGCAGATGAATTAAGAGGTGCTGCAAGAGAGTTCTTTGAGAACGATGGAATTGAAGTGGACCTGGAGAAGAGAACTGTTTATCTAACTCGGATTTTCAAGTGGTTCAGTGGGGATTTTGGACAAGAGAAAGAAATATTGTTGTGGATAATTAACTACTTGGATCCAAATAAAGCCGGTCTTGTGACACATCTCTTGGGAGATTGTGGACCAGTTCATGTCTCTTACCAGAATTTTGATTGGTCAATAAATTCTTGA 1872 0.4834 MGSEANGTEIHNPTHIQTQQQHSNPNIASPENHAKNGYEPVITSHYGGDDAESDRQVTLVHPHSLLPIPVPPQSFKVTENDAVSSNDSNFSVGSFLRQRSSDLSAAIVKRVSSLRQSIEDNNDDEEEENREVTEFNLSGVKVVVTMKHAEEPSIKGRISFFSKSNCRDCTAVRRFFKEKGIKYVEINVDVFGEREKELRERTGSASVPQIFFNEKLIGGLVALNSLRNSGEFDRRVAEMVAGKAAGDDGPAPPAYGFDCVEEERADEMVGVVRVLRQRLPIQDRLRRMKMVKNCFEGNELVEALTQHFHCARDEAVEIGKQLSRKHFIHHVFGENDFEEGNHLYRFLEHEPYIPRCFNFRGTTNDSEPKTAAAICTRLTKIMSAILESYASDDRQHVDYEAISKSEEFRRYVNLTQDLQRVNLLELSENEKLACFLNLYNAMVIHAVISVGCPEGVIDRRSFYSDFQYLVGGHPYSLNIIKNGILRCNRRSPYSLVKPFSTGDKRLEVALIKLNPLLHFGLCNGTKSSPRVRFFSPHRVADELRGAAREFFENDGIEVDLEKRTVYLTRIFKWFSGDFGQEKEILLWIINYLDPNKAGLVTHLLGDCGPVHVSYQNFDWSINS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00974 623 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 279 346 IPR000591 GO:0035556
Pumo7g00974 623 Gene3D Glutaredoxin 153 239 - -
Pumo7g00974 623 ProSiteProfiles DEP domain profile. 275 348 IPR000591 GO:0035556
Pumo7g00974 623 Pfam Protein of unknown function, DUF547 425 550 IPR006869 -
Pumo7g00974 623 ProSiteProfiles Glutaredoxin domain profile. 146 243 - -
Pumo7g00974 623 Coils Coil 108 128 - -
Pumo7g00974 623 CDD DEP 267 345 - -
Pumo7g00974 623 Pfam Glutaredoxin 160 217 IPR002109 -
Pumo7g00974 623 MobiDBLite consensus disorder prediction 1 51 - -
Pumo7g00974 623 SUPERFAMILY Thioredoxin-like 155 237 IPR036249 -
Pumo7g00974 623 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 29 622 - -
Pumo7g00974 623 MobiDBLite consensus disorder prediction 1 31 - -
Pumo7g00974 623 SUPERFAMILY "Winged helix" DNA-binding domain 266 367 IPR036390 -
Pumo7g00974 623 SMART DEP_3 275 348 IPR000591 GO:0035556
Pumo7g00974 623 Gene3D - 263 405 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00974 Pumo-Chr7 17929826 17935817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00974 - - gmx:100810111 1080.86