Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00971 ATGGCGGACTCCGACCTCACCTCGCCGCTCCTCTCCTCCGACCACATCGTTGTCACCGTCCACCCCTCCGCCCCCTCCGCCGCCGGCAGCCCCTTCAGCGCGCTCGGCTGCGACGAGGACCTGTCCGTTCCGCCGCCGTCCACGCTGGACCCGTTCCGCAACCGCACGCCGGCGATTGAGGGGCTCTACGAGTGGGCCAAGACGGCGCTGTGCCTGCCGCTGGCACTGGTGCGGCTCGCGCTGTTCGGGCTCTGTCTCGCGTTGGGGTACGTGGCGACTAAGGTGGCGCTGAAAGGGTGGAAGGACAAGGAGAACCCGATGCCCAAGTGGAGGTGTAGGGTTATGTGGATCACGCGATTGTGCGCCAGATGTATTCTCTTCTCCTTCGGCTATCACTGGATAAAACGGAAAGGAAAACCTGCACCAAGGGAAATTGCTCCAATAATTGTATCTAACCATGTTTCTTACATTGAGCCTATCTTCTATTTCTATGAATTATTTTCCACCATTGTGGCAGCTGAGTCTCATGACTCCATACCTTTTGTTGGCACCATTATTAGAGCAATGCAGGTCATATATGTTAACAGATTCTTACCATCATCAAGGAAGCAAGCTGTCAGAGAAATAAAGAGAAGGGCCTCTTGCGATAGATTTCCTCGAGTACTATTATTTCCCGAGGGAACGACAACTAATGGCAGGAACCTTATCTCCTTCCAACTTGGTGCATTTATCCCTGGATACCCAATCCAACCTGTAATTGTACGCTATCCTCATGTGCACTTTGACCAATCCTGGGGTAATGTTTCTTTGGGAAAGCTTATGTTCAGGATGTTCACTCAATTTCACAACTTTTTTGAGGTAGAATATCTTCCTGTCATTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTCGGGAGAGGACTAGCCGAGCTATTGCAACTGCAATGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTCATATGAAAGCACAAGAAGCAAAACAGGAGAACCCCTCAAGTTTTATGGTTGAAATGACCAAGTTGGAATCATTATTTCATATCAGCAGCATGGAAGCTGTGGACTTTCTGGATAAATTCTTGGCCATGAATCCTGATCCCAGTGGTCGTGTTCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCGCTCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGAGTGGAACAATTACATTCAGACAGTTCTTGTATGGATCTGGCCATGTCATGTCACAACCAGGGTTCCATCAAGCTTGTGAAGAAGCCTTTGCTGGGTGTGGTGGTGCAGCAAAGGCCTATATTGTTGAACAAGAGTTACGAGATTTCATCCAACCTGCTATCCCCAGCTGGAATGAGCATGAGGTCCATGAGCTTTTTGTGTTATTTGATAACGATAATGATGGAAGAATTGACAAGAATGACTTTGTTTCATGCCTTGGAAGAAATCCTCTTCTCATAGCATTTTTTACACCTCAACCACATCAAAAGGAATTTGAAGGTAATGGAGTGATAGAAATAGTGTGA 1575 0.4705 MADSDLTSPLLSSDHIVVTVHPSAPSAAGSPFSALGCDEDLSVPPPSTLDPFRNRTPAIEGLYEWAKTALCLPLALVRLALFGLCLALGYVATKVALKGWKDKENPMPKWRCRVMWITRLCARCILFSFGYHWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFSTIVAAESHDSIPFVGTIIRAMQVIYVNRFLPSSRKQAVREIKRRASCDRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSLGKLMFRMFTQFHNFFEVEYLPVIYPLDDKETAVHFRERTSRAIATAMNAVQTGHSYGDIMLHMKAQEAKQENPSSFMVEMTKLESLFHISSMEAVDFLDKFLAMNPDPSGRVQYHDFLRVLRLKACALSAKIFSFIDVEKSGTITFRQFLYGSGHVMSQPGFHQACEEAFAGCGGAAKAYIVEQELRDFIQPAIPSWNEHEVHELFVLFDNDNDGRIDKNDFVSCLGRNPLLIAFFTPQPHQKEFEGNGVIEIV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00971 524 CDD LPLAT_LPCAT1-like 122 330 IPR045252 GO:0008374
Pumo7g00971 524 SUPERFAMILY EF-hand 352 508 IPR011992 -
Pumo7g00971 524 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Pumo7g00971 524 SMART efh_1 471 499 IPR002048 GO:0005509
Pumo7g00971 524 SMART efh_1 398 426 IPR002048 GO:0005509
Pumo7g00971 524 Gene3D - 348 501 - -
Pumo7g00971 524 SMART plsc_2 147 257 IPR002123 GO:0016746
Pumo7g00971 524 Pfam Acyltransferase 144 251 IPR002123 GO:0016746
Pumo7g00971 524 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Pumo7g00971 524 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 115 324 - -
Pumo7g00971 524 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 43 349 - -
Pumo7g00971 524 Pfam EF-hand domain pair 468 496 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00971 Pumo-Chr7 17821184 17829379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00971 97 328 Acyl Lipid Metabolism Gene Families AT1G80950 29.771 6.01e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00971 K13510 - gmx:100818109 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00971 7 17821184 17829379 Pumo7g00971 7 17821184 17829379 ECH