Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo7g00904 | ATGGAGGCAAAATCACAGGCACGCACCTTAGAGATCACAATTATATCGGGAGAAAACATAAGCATGGATCGAAGTTCTGTCGCAGAGAACGTGTATGTTGTTGTTCGTGCCGAGTCTCTCAATTGTTGCACGACCAAGATGGTGAATGAAGATGGGGGAATGCATGCATGGAACGAGAAATTCTTGTTAGACATTCCTACATATGCAAGGTCGGTTACGTTTGAGGTGCAATGCAAGAAGTATAAAGGGGTTCGCCCTATTGGGGTAGCAAGGATAGCACTTTCGGATTTTCTTAGTAACAATAATACTAAGATTGTGTCGGAAAATGTGCCTCAAATGTTGTGTTACGGGTTGAGGAATTGGGAAGGTAGGAGAAACGGGGTTATTCATTTCTCCGTGAAGGAGGTGACACCAGGGGATAAATTGTGTTCAGAGACAAAACAAGAAAAAGACACAAAGACGGTGAGTTCTAGAGGAATTGAGCATGAGGTTATGGGGTTTCAAGTGGACCCAAAGAAATCAAGTGATGTTGTCATTGGCGTTCCAGTTTGCTGGAGTTACCAAAGTGTTATTGTTTGA | 579 | 0.4301 | MEAKSQARTLEITIISGENISMDRSSVAENVYVVVRAESLNCCTTKMVNEDGGMHAWNEKFLLDIPTYARSVTFEVQCKKYKGVRPIGVARIALSDFLSNNNTKIVSENVPQMLCYGLRNWEGRRNGVIHFSVKEVTPGDKLCSETKQEKDTKTVSSRGIEHEVMGFQVDPKKSSDVVIGVPVCWSYQSVIV | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo7g00904 | 192 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Pumo7g00904 | 192 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Pumo7g00904 | 192 | PANTHER | INGRESSION PROTEIN FIC1 | 6 | 144 | - | - | |
| Pumo7g00904 | 192 | Gene3D | C2 domain | 7 | 135 | IPR035892 | - | |
| Pumo7g00904 | 192 | CDD | C2_SRC2_like | 9 | 131 | IPR044750 | GO:0006952 | |
| Pumo7g00904 | 192 | Pfam | C2 domain | 9 | 102 | IPR000008 | - | |
| Pumo7g00904 | 192 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 151 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo7g00904 | Pumo-Chr7 | 15810896 | 15811740 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo7g00904 | - | - | gmx:100810274 | 311.612 |