Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00889 ATGTGGAAACTCGCGCGATTCGCCGCCGCCTCCAACGTCGCTCGATCGCGGCGGTTCTCCGCCGCGATTCCCGGTCCGTGCATTGTTCACAAACGCGGTGCCGACATACTCCACGATCCCTGGTTCAACAAGGATACTGGTTTTCCTTTGACTGAAAGGGATAGGTTGGGGCTTCGGGGTCTCTTGCCTCCTCGTGTTATATCCTTTGAGCAGCAATATGATCGCTATATGAATTCATTCCGATCTTTGGAGAATAATACTCAGGGGCAACCAGATAAAGTTGTTTCCCTAGCAAAATGGAGGATCTTAAATAGACTGCATGACAGGAATGAGACTTTGTACTACAGAGTTCTTATTGATAATATTAAAGAGTTCGCTCCAATAATATATACTCCTACAGTTGGATTAGTGTGTCAAAATTATTCAGGGTTATTTAGACGTCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCAGCTCATGAGGTAGACATGATTGTCTTAACAGATGGAAGTCGAATTCTTGGCTTAGGTGACCTTGGAGTTCAGGGAATTGGAATCCCCATAGGAAAACTTGATGTGTATGTTGCTGCCGCTGGTATCAACCCACAAAGAATACTTCCAGTTATGCTGGATGTTGGCACCAACAATCAAAATTTACTTGAAGATCGACTTTATTTAGGACTTCGACAACCAAGGTTGGAAGGTGAAGAGTATCTATCAATTGTAGATGAATTCATGGAAGCTGTTCATGCTCGATGGCCCAAGGCTATTGTGCAGTTTGAGGATTTTCAAATGAAGTGGGCTTTTGAAACCCTGAAAAGATATCAGAAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACTGCTGGTGTTGCACTTGCTGGATTATTGGGCACTGTAAGAGCCCAAGGCCGACCATTGACTGATTTTGTGAACCAAAAGATTAGTTGTGGTTGGAGCTGGGAGTGCAGGACTTGGGGTTCTAAAAATGGCCATCCAGGCGGTTGCAAAGATATCTGGGTGCAGTGA 1065 0.4404 MWKLARFAAASNVARSRRFSAAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYDRYMNSFRSLENNTQGQPDKVVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAHEVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQNLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLKRYQKRFCMFNDDIQGTAGVALAGLLGTVRAQGRPLTDFVNQKISCGWSWECRTWGSKNGHPGGCKDIWVQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00889 354 PRINTS Malic enzyme signature 209 231 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 PRINTS Malic enzyme signature 268 286 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 PRINTS Malic enzyme signature 173 202 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 PRINTS Malic enzyme signature 113 137 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 PRINTS Malic enzyme signature 293 309 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 ProSitePatterns Malic enzymes signature. 293 309 IPR015884 GO:0004471
Pumo7g00889 354 PIRSF ME 6 330 IPR001891 GO:0004470|GO:0004471
Pumo7g00889 354 Pfam Malic enzyme, N-terminal domain 107 287 IPR012301 GO:0004471
Pumo7g00889 354 PANTHER MALIC ENZYME-RELATED 22 321 - -
Pumo7g00889 354 FunFam Malic enzyme 31 294 - -
Pumo7g00889 354 Gene3D - 31 294 IPR037062 GO:0004471
Pumo7g00889 354 SMART malic_2 107 287 IPR012301 GO:0004471
Pumo7g00889 354 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 20 296 IPR046346 -
Pumo7g00889 354 Gene3D - 295 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00889 Pumo-Chr7 15545703 15549445 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00889 K00028 - gmx:100811081 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00889 7 15545703 15549445 Pumo7g00889 7 15545703 15549445 ECH
Pumo5g00321 5 7012318 7019381 Pumo7g00889 7 15545703 15549445 PCT