Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00886 ATGGGAGAAGCTACAGAAAGGTATGCAGTTGTGACAGGTGCAAATAAAGGAATTGGATTAGAGATAGTTAGGCAGTTAGCTTCAACTGGAATCAAGGTGGTGCTCACAGCAAGAAATGAGGAAAGGGGTCTCAAAGCACTGGAAACATTCAAAGACTCAGGTCTATCTCACCTTGTATTGTTTCATCAGGTGGATGTGGCTGATGCAACAAGTGTAGCTACTCTAGCAGATTTTATCAAATCTAAATTTGGGAAGCTTGATATTCTGATTAACAATGCAGGCGTTGGTGGAATTGTATTTGAAGACCTTGATTTTATGGCTACAGTCCTCAAGAATCGTGGGGCTATACCAGAAGATGAGAGGACAAAGTCAATTATTCAAACAAATGAGTTAACTGAAGAATGTTTGCAAATAAATTATTATGGAGCCAAAATAACTACAGAATCCCTTTTGCCCCTCCTCCAGTTATCTGATTCTCCAAGAATTGTGAATGTATCAGCCACTCTGGGACAGTTAGAGAGTTTCCCAAAAGGATCATTGGCCAGAGAAGTCTTGAGTGATGCTGATAACCTTGGTGAAGAGAAAGTGGATGAAATATTGAACAAGTTTCTGCGAGATTTCCAAGAAGGTACTTCATTTGAAAGTGAAGGTTGGCCTAGGTACTCGGGTGCCTATATTGTCTCTAAAGCTGCTATAAATGCCTATACTAGAATACTTGCTAAGAAGTACCCTTCATTCTGCATCAATAGTGTTTGCCCTGGTTATGTCAAGACAGATATAAATGCCAACTCTGGCTTCTTAACAGCTGAAGAAGGTGCTGCTAGTCCTGTGAGGCTAGCACTGCTTCCCAATGGTAGTGCATCTGGTCTCTTCTATAGCAGGAGTGGTGTGGCTTCCTTTTGA 903 0.412 MGEATERYAVVTGANKGIGLEIVRQLASTGIKVVLTARNEERGLKALETFKDSGLSHLVLFHQVDVADATSVATLADFIKSKFGKLDILINNAGVGGIVFEDLDFMATVLKNRGAIPEDERTKSIIQTNELTEECLQINYYGAKITTESLLPLLQLSDSPRIVNVSATLGQLESFPKGSLAREVLSDADNLGEEKVDEILNKFLRDFQEGTSFESEGWPRYSGAYIVSKAAINAYTRILAKKYPSFCINSVCPGYVKTDINANSGFLTAEEGAASPVRLALLPNGSASGLFYSRSGVASF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00886 300 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 296 - -
Pumo7g00886 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 286 IPR036291 -
Pumo7g00886 300 CDD carb_red_PTCR-like_SDR_c 7 297 IPR045313 GO:0016616
Pumo7g00886 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Pumo7g00886 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pumo7g00886 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 225 244 IPR002347 -
Pumo7g00886 300 FunFam (+)-neomenthol dehydrogenase 2 300 - -
Pumo7g00886 300 Pfam short chain dehydrogenase 8 173 IPR002347 -
Pumo7g00886 300 PRINTS Glucose/ribitol dehydrogenase family signature 225 244 IPR002347 -
Pumo7g00886 300 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pumo7g00886 300 PRINTS Glucose/ribitol dehydrogenase family signature 244 261 IPR002347 -
Pumo7g00886 300 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pumo7g00886 300 Pfam Enoyl-(Acyl carrier protein) reductase 215 264 - -
Pumo7g00886 300 Gene3D - 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00886 Pumo-Chr7 15486015 15494822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00886 3 178 Acyl Lipid Metabolism Gene Families AT3G55290 28.804 1.63e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00886 K15095 - gmx:102663482 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00886 7 15486015 15494822 Pumo7g00886 7 15486015 15494822 ECH