Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00883 ATGTTAGGAACACCTTCACGTTTGGTCTTTCTTCTTTTCATCTTTGCAATTGCATCACATTCCAATGCATACCCTTTATCAACCCACAACAGATGGATCATGGATGAAGCCACAGGGCAACGTGCCAAGTTGGTGTGTGGCAACTGGGCTGGCCACCTCAAACCAATGATCCCTGAGGGTCTTGACAGAAGGCCCTTGAAGGCCATTGTTTCTGAGCTTGTGGAGCATAAGTTCAACTGCGTTCGTCTCACCTATGCAATCTACATGTGGACACGTTATGGCAATGGCAGTGTGAATGCCACCTTTGACTCTCTGGATGCACCTGAGGTGGTGGATGGCATTGCCAAGAACAACCCTTCTGTGTTGAGTATGACACATGTTGAGGTCTTTGATGCTGTGGTTCATGAGCTTGGGGCTCAGAATGTGAAGGTGTTGCTTGATAACCATGTGAGTGAGCCTAAGTGGTGCTGCCATGATGATGATGAGAATGGCTTCTTCCATGATAGGCACTTTGATCCTCAGGAATGGGTGCATGGCCTTACTATGGCAGCCAAGCACTTCAGTGGAAATCATGCTGTTGTGGCAATGAGTTTGAGGAATGAATTGCATGGTCCACGCCAAAATCTGCGTGATTGGTACAGGTACATGAGCCAAGGAGCACTAGCCATACACAAGGCAAACCCAAATGTGCTTGTGGTTATCTCAGGTTTGAACTATGACACTGAGTTGCAGTTTTTAAAGAGTAAACCATTGAAGATAGACTTGGGTAAGAAAATGGTGTTTGAGACACATTTGTACTCATGGTCTGGAATTGGGACACTCAAATTGAAAGAGATATGGACAAAGCAACCATTGAACAGGATATGTGCCAATAGTATTAAGGGGATAGACCACAGAGCTGGGTTCCTTACCACTGGCAAGAATGCAACTCCTTTGATCTTTACAGAGTTTGGGTTTGATGAGACAGGTTCTTCAGTGGAAGACAACAGGTTCTTGACATGCCTTCAAACCTATCTTGTTGGAAGAGATTTGGACTGGGGTTTGTGGGCATTTCAAGGTAGCTATTATGTAAGAGATGACAAGGTCCAACTTGGTGAGTCATTTGGTGTAATGGATGAGACTTGGCATCACCTGAAAGACCCCAACTTCACTAACAAGTTCCAACTCTTGCAAAGGAAGAATCAAGAACCTACCTCTAAGGCCCCCAGTGTATATATCTTGTACCACCCACTATCTGGTCAATGTGCCCAAGTGAATGGCAAGAATGAACTTGAAGTTGGTAGCTGTGAGAACAAAAACAGATGGGTTTATAGCAGAAATGGGACTGAAATCCTTTTACATGGCACTAAGAAGTGCTTAACCGCAGCCGGTGAAGGGCTTCCAGTTGTTGTTTCTGATGACTGCCAAAGCAAGAACAGTTCTTGGGAATCTGTATCACTATCTAAACTTCACTTGGCTACTATGGATCAACATGAGAAGCAACTTTGCTTACAGAAGGATTCTAACTCATCCAGAATTGTGACTTCAAGATGTATCTGCATAAAAGATGATTCTCTATGTCTTGATGATCCCCAAAGCCAGTGGTTCCAGCTTGTTGTCACCAATGTGTAG 1611 0.4438 MLGTPSRLVFLLFIFAIASHSNAYPLSTHNRWIMDEATGQRAKLVCGNWAGHLKPMIPEGLDRRPLKAIVSELVEHKFNCVRLTYAIYMWTRYGNGSVNATFDSLDAPEVVDGIAKNNPSVLSMTHVEVFDAVVHELGAQNVKVLLDNHVSEPKWCCHDDDENGFFHDRHFDPQEWVHGLTMAAKHFSGNHAVVAMSLRNELHGPRQNLRDWYRYMSQGALAIHKANPNVLVVISGLNYDTELQFLKSKPLKIDLGKKMVFETHLYSWSGIGTLKLKEIWTKQPLNRICANSIKGIDHRAGFLTTGKNATPLIFTEFGFDETGSSVEDNRFLTCLQTYLVGRDLDWGLWAFQGSYYVRDDKVQLGESFGVMDETWHHLKDPNFTNKFQLLQRKNQEPTSKAPSVYILYHPLSGQCAQVNGKNELEVGSCENKNRWVYSRNGTEILLHGTKKCLTAAGEGLPVVVSDDCQSKNSSWESVSLSKLHLATMDQHEKQLCLQKDSNSSRIVTSRCICIKDDSLCLDDPQSQWFQLVVTNV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00883 536 SUPERFAMILY Ricin B-like lectins 401 528 IPR035992 -
Pumo7g00883 536 SUPERFAMILY (Trans)glycosidases 23 382 IPR017853 -
Pumo7g00883 536 Gene3D Glycosidases 23 393 - -
Pumo7g00883 536 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 12 535 - -
Pumo7g00883 536 Pfam Cellulase (glycosyl hydrolase family 5) 65 351 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00883 Pumo-Chr7 15453547 15455781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00883 23 532 Glycoside Hydrolase AT1G13130 39.341 3.43e-140 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00883 K01179 - egr:104441706 589.726