Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00880 ATGGCAGAAGCAACAAAAGGGTATGCTGTTGTAACAGGTGCAAATAAGGGAATTGGATTTGCAACATGCAAGCAATTGGCTTCTAATGGGATCACTGTGGTGCTCACAGCCAGGGATGAGAAGAGGGGTCTTGAAGCTGTTGAGAAACTCAAAGAGCTTGGTCTCCCTGGCCATGTGGTTTTTCATCAACTTGATGTTACAGACCCTGCAGGTATAGCATCAATTGCAGATTTCATCAGGAAGCAATATGGAAAACTAGATATCTTGGTAAACAATGCTGGAACTCCTGGAGCACATGTAGACGGTGAGGCTTTGGGTGCTGCTGGTATTATGGAAAATGCTGGTCGTGTTGATTGGAGTAAAATAGTAACTGATACCTATGAATTAACTGAAGCAGGTCTCAAAACAAACTACTATGGAGCCAAGGAATTGACCAAAGCACTTATTCCCCTTCTCCAGTTTTCAAGCTCCCCAAAAATTGTCAATGTTTCCTCATCCATGGGAAAGCTAGAGCATATACCAAATGGATGGCCTAAAGAAGTACTTAGTGATGTTGAAAACCTTACAGAAGAAAAAATTGATGACATTTTGAAAGAATTTCTAAAGGATTTTAAAGAGGGTTCACTAGAAACCAAAGGCTGGCCTCTTGCTATGCCTGCATATAGTGTCTCTAAAGCTGCTCTGAATGCCTATACAAGGATTCTGGCCAAGAAGTACCCCTCACTCTGCATCAATGCTCTTTGTCCTGGCTATGTCAAAACAGATATAAACTGCAACACTGGTTTTCTAACTCCTGATGAAGGTGCTGAACCTGCTGAAAATGCTGACGAAGTTGCTTGGAGTAAAATAGCAACTGAAACCTATGAACAATCTGAAGTAGGTCTTAAAACAAACTACTATGGAGCCAAGGAATTTACCAAAGCACTTATTCCCCTTCTCCACTTTTCAGCCTCGCCAAAAATTGTCAATGTTTCATCATCTACTGGAAGGCTGGAGTGCATTAATTTGATGATGCTTATGATTTTGCAAAATATACCAAATGGATGGCCTAAAGAAGTATTAAGTGATGCTGAAAACCTTACAGAAGAAAAGATAGATGACGTTTTGAATAAATTTCTGGAATATTCAAAAGAGGGTTCATTAGATACCAAAGGTTATTGGCCATTAGCTGTGCCTACATATACTATATCAAAAGCTGCTGTGAGTGCCTACACAAGGATTTTGGCCAAGAAGTACCCTTCATTCTGCATCAATGTTGTTTGTCCTGGCTATGTGAAAACAGATATAAACTACAATACTGGTGTGCTAACACCTAATGAAGGTGCTGAGCTGTTGCCAGGTTGGCACTGCTACCTGATGGTAGTCCTTCTAGGCCTCTTTTTCTATCGAACTGAAGAAAAATCATTCTAA 1410 0.4043 MAEATKGYAVVTGANKGIGFATCKQLASNGITVVLTARDEKRGLEAVEKLKELGLPGHVVFHQLDVTDPAGIASIADFIRKQYGKLDILVNNAGTPGAHVDGEALGAAGIMENAGRVDWSKIVTDTYELTEAGLKTNYYGAKELTKALIPLLQFSSSPKIVNVSSSMGKLEHIPNGWPKEVLSDVENLTEEKIDDILKEFLKDFKEGSLETKGWPLAMPAYSVSKAALNAYTRILAKKYPSLCINALCPGYVKTDINCNTGFLTPDEGAEPAENADEVAWSKIATETYEQSEVGLKTNYYGAKEFTKALIPLLHFSASPKIVNVSSSTGRLECINLMMLMILQNIPNGWPKEVLSDAENLTEEKIDDVLNKFLEYSKEGSLDTKGYWPLAVPTYTISKAAVSAYTRILAKKYPSFCINVVCPGYVKTDINYNTGVLTPNEGAELLPGWHCYLMVVLLGLFFYRTEEKSF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00880 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 280 444 IPR036291 -
Pumo7g00880 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pumo7g00880 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Pumo7g00880 469 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Pumo7g00880 469 Pfam short chain dehydrogenase 9 170 IPR002347 -
Pumo7g00880 469 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 208 236 IPR020904 GO:0016491
Pumo7g00880 469 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 270 - -
Pumo7g00880 469 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 272 IPR036291 -
Pumo7g00880 469 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pumo7g00880 469 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Pumo7g00880 469 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pumo7g00880 469 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
Pumo7g00880 469 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Pumo7g00880 469 Gene3D - 2 272 - -
Pumo7g00880 469 Gene3D - 273 468 - -
Pumo7g00880 469 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 381 409 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00880 Pumo-Chr7 15346271 15353693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00880 9 267 Miscellaneous Gene Families AT2G29150 26.616 8.21e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00880 K15095 - gmx:100803877 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00880 7 15346271 15353693 Pumo7g00880 7 15346271 15353693 ECH