Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00845 ATGAAACACACAATAACACATGGTCTCCCAGATTGTTCAGCATTTACTTGCAAGTTTGAAACTTTTGCAATCTATGAGAAAATTTTGTGTGCCCCTTTTGCTTTTAGATCTGGAATTGCAGTGATTGCTTTTGGTTACGTTGTGTTTTTTATTTATGGGAAAATGTGGGAAGGTCCCCTGTACTATACAATGGAGCATGTAGATGATGGAAAAGAATCATCAAATAGTGTCAATGAAGTAGAAGCCACTAATTCTCCTATATTTCGTGGCCTTCCAGATGATATTTCTCTTATGTGCCTGGCAAGAATTCCTAGAAAATATCATTCTGCCCTGAAGTGTGTCTCTAAGAGATGGAGGGACTTAGTTTGCAGTGAAGAGTGGTTTTGTTATCGCCGAAAGCACAAACTCGAAGAGACCTGGATTTATGCTTTGTGCAAGGACAGATCAAATGAGATTTTCTGTTATGTTATGAATCCAACCGCCTCGAGAAGATATTGGAAGCTCGTTGATGGTATTCCACCTCACATCTCACAAAGAACAGGCATAGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTATTGGGTGGTTGTAGCGGGTTTCTAGATTCTACTGATGAGGTTTATTCATATGATGCTTCCTCAAACTCTTGGGCTCAAGCTACTTCCTTGTCAACTGCTAGGTACGACTTTGCTTGTGAAGTTTTGGATGAAAAACTATATGCTATAGGGGGAAGAGGTTCAAATTCAAGTGACAATTCTTGTGATACTTTTGACCCTTTGACAAATTGTTGGACATCTCAGACACATCCTAAAATTGTTTCTGATATCAAAGATTCAGTGGTTCTTGATGGGAAGATATACGTCCGATGTACCAGATATCCTTTAACTCCTCATGTATTTGCTGTTGTATATGAACCATCAAGTGGCACATGGCAGTATGCAGATGATGCCATGGTTTCAGGATGGACAGGTCCTGCAGTTGTTGTTGATGGCACCCTTTATGTCTTGGATCAGAGTTTGGGAAGAACTAGGTTAATGATGTGGCGAAAAGAGAGACGTGAGTGGATACCGGTTGCAAGGCTATCACCATTGTCTACTAGACCACCCTTTCAACTTGTTGCAGTTGGTAAAAGCATCTTTATTGTTGGGAGAGTGCTTAGCACTGTGGTTGTTGTTGTTGGTGATTTGGGGAATGAGGATCAGGTGATTGTGGGTTCTGCTATACCCGGATTATTGTTTGATGTCAATGTAATAAGTGTTAAATGCTTGTCAATCTGA 1278 0.4022 MKHTITHGLPDCSAFTCKFETFAIYEKILCAPFAFRSGIAVIAFGYVVFFIYGKMWEGPLYYTMEHVDDGKESSNSVNEVEATNSPIFRGLPDDISLMCLARIPRKYHSALKCVSKRWRDLVCSEEWFCYRRKHKLEETWIYALCKDRSNEIFCYVMNPTASRRYWKLVDGIPPHISQRTGIGFEALGNKLFLLGGCSGFLDSTDEVYSYDASSNSWAQATSLSTARYDFACEVLDEKLYAIGGRGSNSSDNSCDTFDPLTNCWTSQTHPKIVSDIKDSVVLDGKIYVRCTRYPLTPHVFAVVYEPSSGTWQYADDAMVSGWTGPAVVVDGTLYVLDQSLGRTRLMMWRKERREWIPVARLSPLSTRPPFQLVAVGKSIFIVGRVLSTVVVVVGDLGNEDQVIVGSAIPGLLFDVNVISVKCLSI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00845 425 CDD F-box_AtAFR-like 87 131 - -
Pumo7g00845 425 SUPERFAMILY F-box domain 85 134 IPR036047 GO:0005515
Pumo7g00845 425 SMART fbox_2 91 130 IPR001810 GO:0005515
Pumo7g00845 425 Gene3D - 130 396 IPR015915 GO:0005515
Pumo7g00845 425 SUPERFAMILY Kelch motif 150 385 IPR015915 GO:0005515
Pumo7g00845 425 Pfam Kelch motif 226 266 IPR006652 GO:0005515
Pumo7g00845 425 Pfam Kelch motif 179 224 IPR006652 GO:0005515
Pumo7g00845 425 Pfam F-box domain 90 126 IPR001810 GO:0005515
Pumo7g00845 425 SMART kelc_smart 238 283 IPR006652 GO:0005515
Pumo7g00845 425 SMART kelc_smart 190 237 IPR006652 GO:0005515
Pumo7g00845 425 PANTHER OS02G0202900 PROTEIN 71 394 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00845 Pumo-Chr7 14924284 14927788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00845 88 366 Miscellaneous Gene Families AT4G33900 26.490 2.66e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00845 - - gmx:100784812 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00845 7 14924284 14927788 Pumo7g00845 7 14924284 14927788 ECH