Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00675 ATGGCGAGAGTGAAGCACACTCCAGCTTCTCGCAAATCCGTTAAAAAGAAAGCGCCACGCGCATCCACTTCAACGCAGTCACCACCGCAATCCCAATCGCCTGCAACTAGAGAGAGGAGGAGAGCTCAACAAGAGGAGCCGCAGGCGCCTGCGACTCAGGGAAGGAAGAAAAGGCGCAATAGGCCGGGAACTGTGGCGCTTCGTGAGATTCGGCATTTTCAGAGGAGTTGCGAGCTTCTTATCCCGGCTGCCCCGTTTATTAGATGTGTCAAACAAATTACAAGCCAATTCTCTACGGAGGTATCTCGCTGGACACCTGAAGCTGTTGTAGCACTTCAGGAGGCAGCTGAGGAATATCTGGTTCATTTGTTTGAAGATGGAATGCTCTGTGCAATTCATGCAAGGCGTGTTACTCTTATGAAAAAGGATATTGAGTTGGCCCGGAGGCTTGGAGGAATAGGAAGGCCTTGGTGA 474 0.5105 MARVKHTPASRKSVKKKAPRASTSTQSPPQSQSPATRERRRAQQEEPQAPATQGRKKRRNRPGTVALREIRHFQRSCELLIPAAPFIRCVKQITSQFSTEVSRWTPEAVVALQEAAEEYLVHLFEDGMLCAIHARRVTLMKKDIELARRLGGIGRPW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00675 157 Pfam Core histone H2A/H2B/H3/H4 31 150 IPR007125 GO:0003677
Pumo7g00675 157 MobiDBLite consensus disorder prediction 1 64 - -
Pumo7g00675 157 Gene3D Histone, subunit A 2 153 IPR009072 GO:0046982
Pumo7g00675 157 SMART h35 52 155 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 MobiDBLite consensus disorder prediction 1 18 - -
Pumo7g00675 157 FunFam Centromeric histone 3 1 154 - -
Pumo7g00675 157 PANTHER HISTONE H3 1 152 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 PRINTS Histone H3 signature 117 133 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 PRINTS Histone H3 signature 52 73 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 PRINTS Histone H3 signature 133 154 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 PRINTS Histone H3 signature 14 28 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 PRINTS Histone H3 signature 76 93 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pumo7g00675 157 MobiDBLite consensus disorder prediction 19 37 - -
Pumo7g00675 157 SUPERFAMILY Histone-fold 21 153 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00675 Pumo-Chr7 11127170 11131856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00675 K11253 - gmx:100811872 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00675 7 11127170 11131856 Pumo7g00675 7 11127170 11131856 ECH