Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00670 ATGAACGGTGGTGAATCTTACAGTGCTATTGAGACACAGTACATAAGGAGGCATCACAAACATGAACCAAGGGACGACCAGTGCACCTCTGCACTTGTTAAACACATAAGAGCTCCTGTTCACCTTGTGTGGTCGCTTGTTAGAAGATTTGATCAACCACAGAAATATAAACCATTTGTTAGCAGGTGTATCATGCAAGGGGACCTTGGCATTGGAAGCGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGAATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATCACTGTCCATCCGGAGGTCATCGACGGGAGACCCGGCACAATGGTGATCGAATCATTTGTGGTGGATGTGCCTGATGGAAACACCAGGGATGAAACTTGTTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTTTGGCTGATGTCTCAGAGAGGATGGCCGTGCAAGGTCGAACCGATCCGATCAACCATTAA 558 0.4624 MNGGESYSAIETQYIRRHHKHEPRDDQCTSALVKHIRAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPDGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00670 185 Gene3D - 2 181 IPR023393 -
Pumo7g00670 185 CDD PYR_PYL_RCAR_like 28 172 - -
Pumo7g00670 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Pumo7g00670 185 PANTHER - 26 169 - -
Pumo7g00670 185 FunFam Abscisic acid receptor PYL9 2 181 - -
Pumo7g00670 185 SUPERFAMILY Bet v1-like 28 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00670 Pumo-Chr7 11102637 11106446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00670 K14496 - gmx:100500065 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00670 7 11102637 11106446 Pumo9g00416 9 6562236 6562812 ECH
Pumo7g00670 7 11102637 11106446 Pumo7g00670 7 11102637 11106446 ECH