Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00653 ATGTCCCTCCTCACTCGCCTTACCAGCCAAAATTCCTCCACCGCCACGCTCCTCACGCGCCACCTCTCCTCCGCCGCGTCCAAGCTCCACGCCAGCTACACTTTCAAACCCCCTTCTTCTCTCACTCCGGAACCCCAATGCCCCAATTCCCCTCCCACCAAGCCCAACCAGAAAAAGCCCAAGCCCAAGTACCGGCCCCCCTCCTCCCTCGACCGGGCTGGCCGCATGCCGGTCCGCGACGACCTGCCCTTCGACTTCCGGTTCAGCTACACGGAGAGCAGCGCCAAGGTGCGGCCCATTGGGCTCAGGGAGCCCAAGTACTCGCCCTTTGGGCCGGGCCGGCTCGATCGGAAGTGGACCGGAGTGTGTGCCCCGGCGGTGGACCCCACCGTGGAGAGCCTGGAGGGTCCGGAGGACCCTGAGTTGGAGGAGCAGAGGAAGAAGAAGAGAGAGATGATTCATGGAAAACCGCTTACTACTGAAGAGAGAAAGGCACTGGTTTCGCAATTTGAGAGAAGCAAAACTAATAGGCATGTCAATCTCGGGAGGGATGGTTTAACTCACAACATGCTGAATGTTATTCATAACCATTGGAAATTTGCTGAAGCAGTTAGAATCAAATGCATGGGTGTTCCAACTATGGACATGAAAAATATTTGTACCCAGCTTGAGGACAAAACATTTGGGAAGGTCATTTTTAGACATGGGGGTACACTTATATTATACAGAGGCAGGAATTATAATCCGAAAAAGAGGCCTGTAATTCCTCTCATGTTGTGGAAGCCCCATGAACCTGTATATCCCAGACTGATTAAGACAACAATTGATGGCTTAAGTATTAAGGAAACAAAAGAAATGCGGAAGAGAGGACTAGCTGTTCCCGCTTTAACAAAACTTGCCAAAAATGGTTATTATGCTTTTTTGGTGCCCATGGTCAGAGATGCTTTCCTCTCCTGTGAATTGGTTCGGATAGACTGCGAGGGGCTTGAGAGGAAAGATTACAAGAAAATAGGCTGCAAACTCAGGGACATGGTCCCCTGTATTCTGGTGACTTTTGAGAATGAACAAATTGTGGTTTGGAGGGGGAAGGATTATAAGCCCCCGAAGGATGGATACTTTCTTAAAGATCGAGAATCGTTTGACGATGATGATGACTTGTGTGCAGGAAAAGAGCAACAGGCTATGTAA 1188 0.5025 MSLLTRLTSQNSSTATLLTRHLSSAASKLHASYTFKPPSSLTPEPQCPNSPPTKPNQKKPKPKYRPPSSLDRAGRMPVRDDLPFDFRFSYTESSAKVRPIGLREPKYSPFGPGRLDRKWTGVCAPAVDPTVESLEGPEDPELEEQRKKKREMIHGKPLTTEERKALVSQFERSKTNRHVNLGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMKNICTQLEDKTFGKVIFRHGGTLILYRGRNYNPKKRPVIPLMLWKPHEPVYPRLIKTTIDGLSIKETKEMRKRGLAVPALTKLAKNGYYAFLVPMVRDAFLSCELVRIDCEGLERKDYKKIGCKLRDMVPCILVTFENEQIVVWRGKDYKPPKDGYFLKDRESFDDDDDLCAGKEQQAM 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00653 395 MobiDBLite consensus disorder prediction 41 57 - -
Pumo7g00653 395 SMART CRS1_YhbY_2 278 361 IPR001890 GO:0003723
Pumo7g00653 395 SMART CRS1_YhbY_2 158 243 IPR001890 GO:0003723
Pumo7g00653 395 FunFam CRS2-associated factor 1, chloroplastic 157 254 - -
Pumo7g00653 395 MobiDBLite consensus disorder prediction 33 78 - -
Pumo7g00653 395 MobiDBLite consensus disorder prediction 140 158 - -
Pumo7g00653 395 SUPERFAMILY YhbY-like 278 368 IPR035920 -
Pumo7g00653 395 FunFam CRS2-associated factor 1, chloroplastic 277 371 - -
Pumo7g00653 395 SUPERFAMILY YhbY-like 157 253 IPR035920 -
Pumo7g00653 395 Pfam CRS1 / YhbY (CRM) domain 158 243 IPR001890 GO:0003723
Pumo7g00653 395 Pfam CRS1 / YhbY (CRM) domain 279 361 IPR001890 GO:0003723
Pumo7g00653 395 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 14 367 IPR044599 GO:0000373
Pumo7g00653 395 MobiDBLite consensus disorder prediction 129 158 - -
Pumo7g00653 395 Gene3D - 278 372 IPR035920 -
Pumo7g00653 395 Gene3D - 157 254 IPR035920 -
Pumo7g00653 395 ProSiteProfiles CRM domain profile. 276 372 IPR001890 GO:0003723
Pumo7g00653 395 MobiDBLite consensus disorder prediction 64 78 - -
Pumo7g00653 395 ProSiteProfiles CRM domain profile. 156 254 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00653 Pumo-Chr7 10705759 10709001 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00653 - - gmx:100789954 734.561