Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00652 ATGGCACCAAGAACCAGTCGCGGAAAGGCCAAGGGAGAGAAGAAAAAGAAGGAAGAAAAGGTTCTTCCGGTTGTCATAGATATCACTGTGAAGCTTCTCGATGAAACTCATGTTCTCAAGGGAATATCAACGGACAGAATTATAGATGTTCGTCGGCTTTTATCGGTGAATACGGAGACGTGTTATATCACAAATTTTTCCCTGTCGCATGAGGTAAGAGGGCCACGTCTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCCTGCGTCCTCACTTTAGTTGAAGAGGATTACGATGAAGAACGAGCAGTGGCGCACGTGCGAAGACTCCTCGACATCGTCGCCTGCACCACGAGTTTCGGTCCGTCGTCTCCGCCGCCGCCGAAGAATGATTCCGGCACCGTCCCGAAGTTCGGCAAGTCTGAGGCGCCGCCGGCGAAGCAATCTGCGAAAGATGCGGCGGCGGCGACGGTGGCTGACGTGGACGGCGAGATAAGCCACTCGTGCCCAAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTCTCACACCTCACTGCACCTATCCAATATGTGAAGAGAGGTTTGAGGCGGCGCGTGGAGGAGATATCGGAGGAGGCTTATCTGTTCTCGCTGGATGTGAAGGTGTGTAACGGGAAAGTGGTGCACGTTGAGGCTTGCAGAAAGGGGTTTTACAGCGTTGGGAAGCAGCGGATTCTGTGCCATAATCTGGTTGATTTGTTGAGACAGGTTAGCAGAGCTTTTGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCTGAACGTAACAAGTTCGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCAGCACAATCACCCTTATCTTTTCCTCCTCTTCCCGTGGAGGATGAAACGTGGGGTGGGAATGGTGGTGGTCTTGGAAGAGACGGAAAGTATGATTTGATTCCTTGGGCCAATGAGTTTTCATTTATTGCATCTATGCCTTGCCAGACAGCAGAGGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTGCCATTTTTAGAGCAATAAGGGCGGTTAAACATGTTATGGAAGAGCCCAATTTTAGCTGCCCAGTTGTAGAAAATAATATTATTTATACTAAGAGAGTAGGTGACTTGAGTATTAACGTTTTGAAAGATGGTTCTGTTGCAAGCTGTAAGATTGATACTAAAATTGATGGAGTTGAAGCTACTGGAGTAAATCAAAAGGATCTCCTAGAACGAAATCTACTGAAAGGAATTACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTCATTAATGTAAGATATTGTGGTTGTGTGGTCGTTGTGAAAGTTGAGCGTGGAGTTAATGAAAATTTTGACTCTCCATCTCAACAAAATATTGAATTGTTTGATCAGCCAGAGGGTGGTGCCAACGCACTCAATATTAACAGTCTCAGATTACTTCTTCACAACACAACTCCATCAGAAAACAATAAACCAGTGACTCAGATACAAACGTATGAGAGTGAAGAGCTTGGTGCTTCCCATGCTCTTGTGGAGAAGCTGATTAAAGAAAGTCTTGCTAAACTCGAGGAAGAAGAACCAGGTATTGACTATTTTGTAAGATGGGAACTCGGAGCTTGCTGGATACAACATTTGCAAGACCAAAATAATACAGAAAAAGATAAGAAATCTTCTTTGGAGAAGGCTAAGAATGAAATGAAGGTTGAGGGTCTCGGGAAACCCCTTAAAGCCCTAAAGAATTACAAAAAGAAATCTGATTCAAGCAATACTAATTCTGCATCTGAATATTCAAAATTTAATCGGGAGGCTGAAAGCCCTCCATTGGCCTCAATTGAATCCCAACATGAAACTACAGAAGCTGAGAATGAGCTTGTTCTGAAAAAGATGATATCTGAGGAAGCTTTTACCCGATTAAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATCCATGATTTGATTGACTTATCTCAAAAATATTACACAGATGTTGCTCTCCCAAAATTGGTGGCAGATTTTGGCTCATTAGAACTCTCACCAGTTGATGGACGCACTCTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGTTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTTTCACATGTTCAATCACTTTGTATTCATGAGATGATAGTTCGAGCTTTTAAGCACATCCTGCGGGCAGTAATTTCTTCTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGGTGCATTGAATTTGCTGCTTGGTATTCCTGAAAATAGAGAATCAGATAAATCACGTGAAGTTCACCCCTTGGTGTGGAAATGGCTAGAGTTGTTTTTGAAGAAGCGATTTGATTGGGATCTTAACAGGTTGAATTATAAAGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCTCCAATTCCCTTCCACAAATCTGATATTATCAGCTTGGTCCCTGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCCTAGAGTCATCCAAAACTGCTTTAGACAAGGGAAAGCTTGAGGATGCAGTTACCTATGGCACAAAGGCTCTTGCTAAGCTGGTAGCAGTTTGTGGTCCCTACCATCGGATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTGGATATCAACGAGAGAGAGTTAGGTCTAGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACAGAGCTGGCTCTGAAGTATGTGAAACGTGCTTTATATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACTGCTGCTACTTATATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTTGCTCTCAGATATCTTCACAAAGCATTAAAATGCAACCAAAGATTACTTGGCGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTAATGGAAGCATATCCATTGAGTGTGCAGCATGAGCAAACGACTTTGCAAATTCTGCGGGCAAAACTTGGCCCTGATGACTTGCGCACACAGGATGCTGCGGCTTGGCTTGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTAAGTGTGTCAGATTTGCTTGACTACATTAATCCTAATCATGATACTAAAGGGAGAGATGCAGCAAGGAGAAGAAGCCAGATAGCAAAGATGAGAGCAACACCATATCAGAACATTGGCATGTCAAGTTCTGATGAGTCTTCAAAAGAAATTCTGAAAGAGGCTTCAGATGAAGAGGTACAAATACCTGTACCAGTAGGTAGTGCAGATTCAGAGCATGAAAGCAACTCTGGACCTGATTCGGAACATACTATTTCAAAACACATATCAGATGAAAAGCCACAAGTTTATGATGAAATCTTGTCTGAAGCACATGCTGAAGGAGAGGATGGATGGCAACCAGTTCAAAGACCAAGATCAGCTGCCTCATATGGCCGGAGACTGAAGCAGAGACGGGCAACACTTGGCAAAGTTTATAGTTATCAAAAGAATGTGGAATTTGGCACAGAATCTCCTTTTGTAAGGAGTGCGAATCCGAATAGTAGGTATTATTTCTTGAAGAAGCGGACAATTTCCCATGGGGGTTATACAGATGATCATGCTGTAAACATCACCCAAGGCACTAAATTTGGAAGAAAAGTAGTCAAAGCTGTTACATACAGGGTCAAGTCCGTGCCCTCGACTTCCAAGACTAGTGCAAATGAGACATTAGAAAATGGGGACAAACTGTTCAGTTCTCTTCCAGAACCTGATCCAATTGATGTTAATCCAGTTAAGAATTCTATAGTTAGTCTTGGAAAGTCTCCTTCATACAAGGAAGTGGCCTTAGCTCCTCCAGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCAGAGCGAGATTTCTGTTAGCTATGAACATGATGGTGGCAAACATGAAAAGGAAGATATTGAAGCTAATAGAAATGTTAATGTTATTCCAACCCTGACAGAGGTAAATGATATGGCTAAAGAGAAGAATATTGATTCTTTATCAGATTCTGTAGATGATTCACAGGATGATACTGGAGTTGCTACTGAGGGGAAAGAGGAAACTCAGTTGATTGTTGCTGTGCAAGATAATTGTATGAGTGCTGAGGGGCAATCAGGAGATGTTGAGGCTCAAGGCACAGTTGATAACAACATATTGATTCATGCAGTAGATGATCATGTGGATTCGTACAAACAAGAACTTGATACAAGTAATTCATCTGGCAGTTTAGAACCTAGTGATAATACAAATCCCATTTCTCAGGGTGGCGAGGATTTAAGAGTCAATGTATCACCATCAAGTCAGAGTAATGCCGGAGGCATCCCGTATAAGAAATTGTCTGCATCTGCAGCTCCATTCAACCCATCACCTGCCATTGCACGTGCTGCATCAATTGCCATGAATATGACTCTTCCTCCTGGTCCTAGTGCAGTTCCTGCAATTGGTCCCTGGCCAGTAAACATGAATGTTCATCCCGGACCTACTACTTTGCTAGCCCGCAGTTGCTCCCGATGGGCTCTTCTCCCCACCATGCATATCCATCACCTCCAACAACACCAAACATGA 4866 0.4314 MAPRTSRGKAKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTETCYITNFSLSHEVRGPRLKDTVDVSALKPCVLTLVEEDYDEERAVAHVRRLLDIVACTTSFGPSSPPPPKNDSGTVPKFGKSEAPPAKQSAKDAAAATVADVDGEISHSCPKLENFYEFFSLSHLTAPIQYVKRGLRRRVEEISEEAYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQVSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPLSFPPLPVEDETWGGNGGGLGRDGKYDLIPWANEFSFIASMPCQTAEERQVRDRKAFLLHSLFVDVAIFRAIRAVKHVMEEPNFSCPVVENNIIYTKRVGDLSINVLKDGSVASCKIDTKIDGVEATGVNQKDLLERNLLKGITADENTAAHDITTLGVINVRYCGCVVVVKVERGVNENFDSPSQQNIELFDQPEGGANALNINSLRLLLHNTTPSENNKPVTQIQTYESEELGASHALVEKLIKESLAKLEEEEPGIDYFVRWELGACWIQHLQDQNNTEKDKKSSLEKAKNEMKVEGLGKPLKALKNYKKKSDSSNTNSASEYSKFNREAESPPLASIESQHETTEAENELVLKKMISEEAFTRLKESGTGLHCKSIHDLIDLSQKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISSVDKEKMASSIAGALNLLLGIPENRESDKSREVHPLVWKWLELFLKKRFDWDLNRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPIPFHKSDIISLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDAARRRSQIAKMRATPYQNIGMSSSDESSKEILKEASDEEVQIPVPVGSADSEHESNSGPDSEHTISKHISDEKPQVYDEILSEAHAEGEDGWQPVQRPRSAASYGRRLKQRRATLGKVYSYQKNVEFGTESPFVRSANPNSRYYFLKKRTISHGGYTDDHAVNITQGTKFGRKVVKAVTYRVKSVPSTSKTSANETLENGDKLFSSLPEPDPIDVNPVKNSIVSLGKSPSYKEVALAPPGTISKLQVYNPQSEISVSYEHDGGKHEKEDIEANRNVNVIPTLTEVNDMAKEKNIDSLSDSVDDSQDDTGVATEGKEETQLIVAVQDNCMSAEGQSGDVEAQGTVDNNILIHAVDDHVDSYKQELDTSNSSGSLEPSDNTNPISQGGEDLRVNVSPSSQSNAGGIPYKKLSASAAPFNPSPAIARAASIAMNMTLPPGPSAVPAIGPWPVNMNVHPGPTTLLARSCSRWALLPTMHIHHLQQHQT 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00652 1621 Pfam Translation initiation factor eIF3 subunit 135 701 842 IPR033646 -
Pumo7g00652 1621 SUPERFAMILY Hypothetical protein c14orf129, hspc210 208 270 IPR023231 -
Pumo7g00652 1621 CDD CLU-central 703 843 IPR033646 -
Pumo7g00652 1621 ProSiteProfiles Clueless (Clu) domain profile. 302 579 IPR025697 -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1500 1538 - -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1192 1209 - -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1499 1538 - -
Pumo7g00652 1621 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Pumo7g00652 1621 Coils Coil 565 592 - -
Pumo7g00652 1621 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1412 IPR027523 GO:0006996
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1222 1243 - -
Pumo7g00652 1621 SUPERFAMILY TPR-like 950 1077 IPR011990 GO:0005515
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1431 1452 - -
Pumo7g00652 1621 Pfam Tetratricopeptide repeat 912 982 - -
Pumo7g00652 1621 Pfam Tetratricopeptide repeat 996 1070 - -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1148 1163 - -
Pumo7g00652 1621 ProSiteProfiles TPR repeat profile. 913 946 IPR019734 GO:0005515
Pumo7g00652 1621 SUPERFAMILY TPR-like 879 984 IPR011990 GO:0005515
Pumo7g00652 1621 Gene3D Tetratricopeptide repeat domain 874 987 IPR011990 GO:0005515
Pumo7g00652 1621 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 868 1118 - -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 1148 1209 - -
Pumo7g00652 1621 Gene3D Tetratricopeptide repeat domain 988 1109 IPR011990 GO:0005515
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 120 153 - -
Pumo7g00652 1621 SMART tpr_5 913 946 IPR019734 GO:0005515
Pumo7g00652 1621 SMART tpr_5 955 988 IPR019734 GO:0005515
Pumo7g00652 1621 SMART tpr_5 997 1030 IPR019734 GO:0005515
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 602 640 - -
Pumo7g00652 1621 MobiDBLite consensus disorder prediction 607 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00652 Pumo-Chr7 10673991 10689380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00652 K03255 - gmx:100808136 2815.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00652 7 10673991 10689380 Pumo7g00652 7 10673991 10689380 ECH