Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00635 ATGCCACCTCAAATGCAGCCCTTCGGCGTTTTCCTCCGCGACCCGCCGCAGAACGACGGCCGTAACCCTCCGGCGAAGCCCACCGTGAAGGAAACGCTAATAGTAGAAGACTCCTCCTTAGACAACCCGGATCTGGGCCCATTCCTTCTAAAGATGGCCCGAGAAACAATCGCTTCAGGAGAAAGCCCAGTAAAGGCCCTGGACTTCGCAATTCGGGCCTCAAAATCCTTCGAGCGGTGTGCGGGCCCGGGCCTGGAGCTTGCCACGTGCCTCCACGTGGTTGCTGCGATCTACAGCAGTTTGGGGCGGTTGGATGAGGCGGTTGAGGCTTTGGAACGGTCCATTTTGTTGTTGGATAGTGAAAACGGGTCGGGTCATGCCATGGCCCACTTTTCCGGGTACATGCAACTTGGGGACACTTATTCCATGATTGGACAGTTGGATAGGTCCATTAAGTGTTACGAGTCGGGTTTGAAGATCCAAATGGATGTTTTGGGTGAATCCGACCCGAGAGTTGCTGAGACTTGTAGGTACCTAGCTGAAGCTCATGTTCAAGCCATGCAATTTGATCAGGCAGAGAACTTCTGCAAGAAGACCCTTGAAATTCATAGGGAGCATTGCTCTCCTGCTTCCCTTACCGAAGCAGCCGACAGGCGTCTAATGGCCCTTATATGTGAGGCAAAGGGAGATTATGAACCAGCACTTGAGCACCTTGTCCTAGCTAGCATGTCAATGACCGCTAATGCACAAGATAACGAGGTTGCAGCTATTGATGTTAGCATTGGAGACATTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTTTTCGCCTATCAGAAAGCACTAACAGTGTTCAAATCCACCAAAGGTGAAAGCCACAGTTGTGTGGCATTAGTGTACATTCGCCTCGCTGACCTCTACTACAGGACAGGAAAGTTAAGAGAGTCAAAATCATATTGCGAAAATGCCTTAAGAATATACAGTAAGCCTGTGGTTGGAACAACAGCCGGGGAGATTGCGAGTGGGTTGACTGAAATCTCTTCCATCTATGAGGCTCTAAATGAGCCTGAGGAAGCACTGAAGCTGTTGCAGAAGGCAATGAAATTGTTGGAGGATATCCCTGGACAATATAGGACAGTGGCAGGAATAGAAGCTCAAATGGGAGTGATGTTCTACATGGTTGGGAGGTATATGGATGCTTGGAAGTCTTTTGAGAATGCTATCACCAAGCTGAGAGCCAGTGGGGAGAAGAAATCTGCCTTTTTTGGAGTTGTATTGAACCAGATGGGGCTGGCATGTGTGCAACTGTATAAAATAGGGGATGCTGCCAAACATTTTGAAGAAGCAAGAGAGATATTGGAGAGAGAGTGTGGAACATATCATTCTGACACTCTTGGGGTGTATAGCAATCTTGCAGCAACTTATGATGCCTTGGGGAGAGTTGAAGATGCCATTGAGATATTGGAATACATACTAAAGATGAGAGAAGAAAAACTTGGAACTGCAAATCCAGATGTTGATGATGAAAAGAAGCGACTATTTGAGCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAGAAAGGGAAAAAAATCACTTGAAAACCTTATAGATTCCAATTCCTTAAAGATGAAGAAGGAAGGAAAAAAAAGATGGGCTGCTTTTGGTTTGAGAACTTAA 1677 0.4675 MPPQMQPFGVFLRDPPQNDGRNPPAKPTVKETLIVEDSSLDNPDLGPFLLKMARETIASGESPVKALDFAIRASKSFERCAGPGLELATCLHVVAAIYSSLGRLDEAVEALERSILLLDSENGSGHAMAHFSGYMQLGDTYSMIGQLDRSIKCYESGLKIQMDVLGESDPRVAETCRYLAEAHVQAMQFDQAENFCKKTLEIHREHCSPASLTEAADRRLMALICEAKGDYEPALEHLVLASMSMTANAQDNEVAAIDVSIGDIYLSLCRFDEAVFAYQKALTVFKSTKGESHSCVALVYIRLADLYYRTGKLRESKSYCENALRIYSKPVVGTTAGEIASGLTEISSIYEALNEPEEALKLLQKAMKLLEDIPGQYRTVAGIEAQMGVMFYMVGRYMDAWKSFENAITKLRASGEKKSAFFGVVLNQMGLACVQLYKIGDAAKHFEEAREILERECGTYHSDTLGVYSNLAATYDALGRVEDAIEILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRNRKGKKSLENLIDSNSLKMKKEGKKRWAAFGLRT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00635 558 Gene3D Tetratricopeptide repeat domain 84 240 IPR011990 GO:0005515
Pumo7g00635 558 ProSiteProfiles TPR repeat profile. 340 373 IPR019734 GO:0005515
Pumo7g00635 558 ProSiteProfiles TPR repeat profile. 255 288 IPR019734 GO:0005515
Pumo7g00635 558 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 30 540 - -
Pumo7g00635 558 MobiDBLite consensus disorder prediction 1 27 - -
Pumo7g00635 558 Gene3D Tetratricopeptide repeat domain 424 549 IPR011990 GO:0005515
Pumo7g00635 558 Pfam Tetratricopeptide repeat 343 369 IPR019734 GO:0005515
Pumo7g00635 558 Pfam MalT-like TPR region 92 245 IPR041617 -
Pumo7g00635 558 Pfam Tetratricopeptide repeat 425 497 - -
Pumo7g00635 558 Pfam Tetratricopeptide repeat 254 328 - -
Pumo7g00635 558 SUPERFAMILY TPR-like 88 501 IPR011990 GO:0005515
Pumo7g00635 558 SMART tpr_5 340 373 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 88 121 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 423 456 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 381 414 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 465 498 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 297 330 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 131 164 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 255 288 IPR019734 GO:0005515
Pumo7g00635 558 SMART tpr_5 173 206 IPR019734 GO:0005515
Pumo7g00635 558 Gene3D Tetratricopeptide repeat domain 241 423 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00635 Pumo-Chr7 10412093 10416418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00635 94 300 Glycosyltransferase AT3G04240 23.853 6.41e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00635 - - gmx:100794697 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00635 7 10412093 10416418 Pumo7g00635 7 10412093 10416418 ECH