Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00601 ATGCAGCAGACACCGCCTATGATTCCTATGATGCCTTCGTTCCCACCTACGAACATAACCACCGAGCAGATTCAAAAGTACCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAAACCCCAGCCATGCCTCCACAGATGGCACCACACCCTGCCATGCAACCAGGATTTTATATGCAACATCCTCAGGCTGCAGCAGCAATGGCTCAGCAGCAAGGAATGTTTGCCCAGAAAATGCCGTTGCAATTTGGTAATCCACATCAAATGCAGGAACAACAGCAGCAGCTACACCAGCAGGCCATCCAAGGTCAAATGGGACTGAGACCTGGAGGGATAAATAATGGCATGCATCCAATGCACAACGAAGGCTGCTCTTGGAGGCGGCAACAGCGGTGGTCCACCTTCGGCTACTGTCGTCCATGGTACCTCAATTCTTGGGTGCTTACTTGTGGATTAGAAGATGAGCTGGAAGATAAGTTTTATATTCCTCGAGAACCAGAGCCGGTATAA 612 0.4788 MQQTPPMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMAPHPAMQPGFYMQHPQAAAAMAQQQGMFAQKMPLQFGNPHQMQEQQQQLHQQAIQGQMGLRPGGINNGMHPMHNEGCSWRRQQRWSTFGYCRPWYLNSWVLTCGLEDELEDKFYIPREPEPV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00601 203 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 148 IPR044779 GO:0003713
Pumo7g00601 203 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00601 Pumo-Chr7 9850428 9856463 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00601 - - gmx:100804074 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00601 7 9850428 9856463 Pumo7g00601 7 9850428 9856463 ECH