Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00583 ATGGCAACATTGACTGCTTCATGTAACTTAGTCTCTAGAAATTCTCATGTCCACCATGGACCAACTGCTTCATATGAGTCTAAAGCAGTGGCAATGGGACTCAGATCTCTAAAGCAGACCAATACTCATAGTGGACTAAGAATTTTGAACCCGGTGGATGAGCTACTTAACAGAACCCCAATTAAAATCAATGCAGTGCAAGCTATGAGGAACGGACCTCAAAGCAAGAATGTCAGGCCTACAGGTATAATCACATGTGGCATGACTTTTATATTTATAGGAACGGAGGTGGGTCCATGGAGCAAAACTGGTGGGTTAGGAGATGTTCTTGGAGGTTTACCACCAGCATTGGCAGGTTTTGGGCATCGAGTAATGACTATTGCGCCGCGCTATGACCAGTACAAAGATGCATGGGATACAAGTGTTGAAATTGAGGTGAAAGTAGGAGATAGAACAGAAAAGGTTCGCTTCTTCCATTGCTATAAGAGGGGAATTGATCGTGTCTTTGTGGATCACCCTTGGTTTCTTGCAAAGGTCTGGGGGAAAACTGGAACCAAACTTTATGGACCAACTACAGGAGATGATTACGAAGACAACCAACTGCGTTTTAGCCTCTTTTGCCAGGCTGCTTTGGAAGCCCCAAGGGTTCTGAGTCTTAATTCCAATAAATATTTCTCTGGACCATATGGTGAAGATGTCATATTCGTTGCCAATGATTGGCACACTGCCCTTCTCCCCTGCTACTTAAAAAGTATGTACCAGTCAAGGGGCATCTATGTGAATGCCCGGGTTGTTTTTTGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTTGCCGACTTCTCACTTCTAAATCTCCCAGACCAATTTAGGAGCTCCTTTGACTTTATTGATGGGCATGTTAAACCAGTGGTTGGAAGGAAAATCAATTGGTTGAAAGCTGGACTTATAGAATCATGGTATGTGATAACTGTTAGTCCAAACTATGCTAAAGAACTGGTGTCAGGTCCAGACAAAGGAGTGGAATTGGACAACATCCTTCGCAAAATTGATGATGAAGATCGTTTTGTTGGAATTGTGAATGGCATGGATGTTCAGGAGTGGAATCCAACCACTGATAAATATATAGCTGTCAAATACGATGTTTCAACAGTGTTGGAAGCAAAGGCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCGGTCGACAGAAATATTCCTCTCGTTGGTTTCATTGGAAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGCAGAAGCCATTCCCCAATTTATTAAGGAGAATGTTCAGTTGGTAGCCCTAGGAACAGGAAAAAAACAAATGGAAAAACAGCTTGAGGAACTTGAAATATCATACCCTGACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCCCCTAGCCCACATGATAATTGCTGGAGCTGATTTTATGTTGCTTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGATCTGTACCAATTGTTGCCTCAACAGGTGGATTAGTTGACACTGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTGCCTTCAATGTTGAATGTGATGCTGTGGATCCAGCTGATGTGGATGCTATAGCAAAGACTGTCAAAAGGGCTACTGCAGTCTATGGAACTCCAGCTTTTACAGAAATGATCAAGAACTGCATGGCTCAAGATCTTTCATGGAAGGGGCCTGCTAAGAAGTGGGAGGAAGTACTGCTAAGCTTGGGTGTTCCTGGCAGTGAACCTGGAAATGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAATGTGGCAACTCCATAA 1857 0.4313 MATLTASCNLVSRNSHVHHGPTASYESKAVAMGLRSLKQTNTHSGLRILNPVDELLNRTPIKINAVQAMRNGPQSKNVRPTGIITCGMTFIFIGTEVGPWSKTGGLGDVLGGLPPALAGFGHRVMTIAPRYDQYKDAWDTSVEIEVKVGDRTEKVRFFHCYKRGIDRVFVDHPWFLAKVWGKTGTKLYGPTTGDDYEDNQLRFSLFCQAALEAPRVLSLNSNKYFSGPYGEDVIFVANDWHTALLPCYLKSMYQSRGIYVNARVVFCIHNIAYQGRFAFADFSLLNLPDQFRSSFDFIDGHVKPVVGRKINWLKAGLIESWYVITVSPNYAKELVSGPDKGVELDNILRKIDDEDRFVGIVNGMDVQEWNPTTDKYIAVKYDVSTVLEAKALLKEALQAEVGLPVDRNIPLVGFIGRLEEQKGSDILAEAIPQFIKENVQLVALGTGKKQMEKQLEELEISYPDKARGVAKFNVPLAHMIIAGADFMLLPSRFEPCGLIQLQAMRYGSVPIVASTGGLVDTVKEGFTGFQMGAFNVECDAVDPADVDAIAKTVKRATAVYGTPAFTEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGNDGEEIAPQAKENVATP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00583 618 Pfam Starch synthase catalytic domain 91 350 IPR013534 -
Pumo7g00583 618 Pfam Glycosyl transferases group 1 410 531 IPR001296 GO:0016757
Pumo7g00583 618 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 80 596 - -
Pumo7g00583 618 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 41 590 - -
Pumo7g00583 618 FunFam Starch synthase, chloroplastic/amyloplastic 370 575 - -
Pumo7g00583 618 Gene3D Glycogen Phosphorylase B; 91 584 - -
Pumo7g00583 618 NCBIfam glycogen/starch synthase, ADP-glucose type 88 591 IPR011835 GO:0004373
Pumo7g00583 618 Hamap Glycogen synthase [glgA]. 88 593 IPR011835 GO:0004373
Pumo7g00583 618 MobiDBLite consensus disorder prediction 594 618 - -
Pumo7g00583 618 Gene3D Glycogen Phosphorylase B; 365 575 - -
Pumo7g00583 618 CDD GT5_Glycogen_synthase_DULL1-like 91 592 - -
Pumo7g00583 618 FunFam Starch synthase, chloroplastic/amyloplastic 89 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00583 Pumo-Chr7 9321289 9325713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00583 1 618 Glycosyltransferase AT1G32900 69.404 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00583 K13679 - gmx:100037476 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00583 7 9321289 9325713 Pumo7g00583 7 9321289 9325713 ECH