Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00582 ATGGAGCTCGACCTCCGTTCATTCCTTCACTCTCCCACCTCCACCTCCTCCTCCGACGCCGACGGCGACGACGCTCCTCACCGCACCATCGATGATATTCTCAACGACTGTGACACTTCCTCTTCCTCACCCTCCCCTCCTTCTTCTCCCTCTCACTCCCTCACCAACAATTCCCATCCTCAAAACCCCACACTACAACAAAAACCACTCCAACCCGCACCCGATTCGTTTTCCCGGGTCAAACCCGCAGAATTCTCCGACCGCACACGCGTTTCGCGCCCGTTCTCCTCTCTCCTCCACGGCGTTCGGTCCAATGCCAAGCCCGGCGCGGCGCTCGCCGCGGCGGCGGCGGCGTCTCGATCCGTTCCTACGCCGCACGCGGCGGCGATACTCTCCAGGAGGAAATCGGCGGCCGTGAACAGCGCCGAATCGAGTTCGATCGCTGCCACCGGCGACGATTCTTCCGATGTTTCTTCTTCCAAAGGCGAATTGGGCGAGCCTAGCGAGAAATTCGATCCAGTGCCACAGAAAATCGAGACTCAATCTAGTGAAAGTGCTTCTGCTATTGGTGAACGTTTTGAGAGTGATGCGGAAATTGCCACTGATTTGACGGCTGGCAGTGCTGACATTCAGGTGCACAGCGATAATGATAATTATAATGGTAATGATAATGATAATGGTAATGGTAATGATAATGATAATGATTCTCCTATAGTGAGTGAGGACAAGAGGGATTTAGATGAGGTTGGCCGTGATCACGAAAAGGATATGAATTCTGCACCGTTTGATGATGATGATCGTGAGTTTGATGGAAATGATGGTGGTGATGAGAGAATCACAGCTACGGATGCAGCTGTGGAAGCAGAAGAAGAAGTAGTGAATAATGGTAGTAGTTCTATGGAGGATGTTAAGAATGAGGTGAGTGCTGCTGGTGGTGATGAGGGTAGTTCATTAGGTGATGTTGCTGAGCTAGTGGAAGAGAGACTTGAGGAATTGGAAAGCAGAAGGGCTGCTAAGAGAGCTGAGAAGAAACGAGAGTCTTTGATGAAGCCGCTTGAATTGGCCGAGGAACTGGAGAAGAAGCGTGCTTCAACTGGTTTGCATTTGGAAGAGGGTGCTGCTGCCCAGCCAATGAGGCTCGAGGGCGTTCGGAGAGGCTCCACGACGTTGGGATACTTTGATGTTGATGCCGATAATGCATTCACGAGGGCCATTTCATCCCAAACGTTCAGGCGTGAGCAAGGTTCCACCCGAGCCTTGGCAGTTCATGCTAATTACATTGCAGTAGGAATGTCAAAAGGGCTCATTGTTGTGTTTCCCAGTAAATATTCCATTCATCATGCTGACAACTCTGATGGAAAGATGTTGATGCTTGCTATACAAGGTGATCGGTTGCATGCTCCAGTAACATCCATGTCTTTCAATCAACAAGGAGACCTTCTTTTAGCTGGTTATGGTGATGGTCATCTTACACTGTGGGATGTACAGAAAGGGGTAGTTGCAAAAGTTATTAGTGGTGAGCATACAGCACCAGTAGTACACACGTTGTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACTGGTGATTGTAAGGGTCTGGTTCTCTTCCACATTATCTCAGTGGTTCCTTTGTTTAGTAGATTCTCCATCAAAACTCAGTGTCTTCTTGATGGGCAAAGTACGGGCTTGGTGCTTTCAGCTTCACCACTCCTTTTTGATGACTTCAGTGGAAGTGCTTCACCTTTTACCCAGGGAAACACCTCAGCCCCAGCCAGCAGTATAAGCAGCATGATGGGAGGTGTTGTTGGCGGAGATGCAGGTTGGAAACTCTTCAATGAAGCCCCTTCTTTGGTTGAAGAAGGTGTGGTTGTGTTTGTCACCCATCAAACTGCTTTGGTGGTACGGCTGAGCCCTACATTGCAAGTCTATGCTCAACTCTCTAGGCCAGATGGAGTTCGGGAGGGTTCCATGCCATACACTGCATGGAAATACATGACGCAAACATGTAGTTCTACTGAAAATACGTCTGCAGAAGCTGTTGAAAGAGTTTCATTGCTTGCAATTGCTTGGGAACGGAAGGTTCTGGTTGCAAAGTTGGTCAAATCGGAATTAAAAGTATATGGAAGATGGTCTCTTGACGGTGCGGCTATAGGTCTAGTATGGTTGGATGATCAGATGCTGGTAGTTCTCACTTCAAGTGGACAATTGTATTTATTTTCCAAGGATGGAACTGTGATTCACCAAACAAGTTTTGCCGGAGATGGTATTGGAGGAGATGATCTAGTCTCTTATCATACTCACTTCATCAATATATTTGGAAATCCTGAGAAAGCTTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAACACATCTTCTTGTTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTTCTGTCTTGCGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGAGTTGTTGACCTTCCTAGAACCTTGGATGCTGTACATGAGGCCATAATGCCATTCTTGGTGGAGTTGCTTACATCATATGTTGATGAAGTGTTCTCCTATATTTCGGTGGCATTCTGCAACCAAATTGGAAAACTGGACCAATCCAATTATTCAAATAGTAGAAGCAATTCAGTGCATTCTGAGATAAAGGAGCAATACGCCCGTGTTGGTGGAGTTGCTGTTGAGTTTTGTTGCCATATCAAACGGACGGACATTCTTTTTGATGAAATTTTCTCTAAGTTCGTGGATGTTCAACAGAGAGAAACATTTTTGGAACTTCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAGAGTATTATAGCACCAAAGGGTGGTTACAGCGGGTTGAGCAATGTGTACTTCACATGGATATATCATCCTTGGATTTTAATCAGGTCGTCAGATTATGCCGGGAGCATGGACTATATAGTGCCCTGGTGTATGTCTTCAATAAAGGATTAGATGATTTTAGGGCACCTCTGGAGGAGCTGTTTGCTGTCTTACAAAATAGCCAAAAGGAAAGTGCTACTGCACTTGGGTATCGAATGCTGGTTTATCTCAAGTACTGCTTTACAGGTCTTCCCTTTCCACCAGGCCGTGGAACTATTCCTCCCACACGCTTACCATCTCTTAGAAGAGAACTTGTAGAGTTTTTGTTAAAGGACTCCTGTACTCCGAAATCACATACAGTTTCAGATTCTGTGTCCAGACGACCCCACCTGAATCTTTATCTTCTCTTAAAGTTAGACACTGAAGCTACATTAGACGTCCTCAGATGTGCTTTCATGGAAGATGAAATTTCAAATGCCAGCTCATCTTCACCGGATTCAGCCAATAAACCTATAGAGGAAGCAGAAAAGGAAAATGATAATGTTACTGAAACTCAAAATGTTTTGGTTCAGAACACAGTTGATGCTCTCATTCAAATAATTGATATGAATATTGTTCCGACAGATACAACCTCTAGTAGTGGTGATGATGGGTTGATAAAAGAGTGGCCTTCCAAGGACATAGGTTATTTGTTTGAGTTCATTGCATATTATGTTGCTCTCCAAAGGGCTAAGATTTCAAAGGGTGTGCTTTGTCAAATATTGGAGTATTTGACATCAGATAGTCACTTTTCAACTAATGTTTCTGTTCATTGTTCAACTCCTAAAAATAGAGAGAAGCAAGTGCTTGCACTTTTGGAAGTACTTCCTGAGTCAGACTGGGATGCATCGTTTGTGCTAGATCTATGTGAGAGAGCCAAATATCATCAGGTTTGTGGATTGATCCATAGTATCAGACATGAATATGTGGCCGCATTGGATAGTTATATGAAAGATGTAGATGAGCCTGTTCATGCCTTCTCCTTTATTGACAAAGCATTCTCACAGTTGACTGACAATGACCATGCAGCTTTTCGGTCAGCAGTCATATTACGAATTCCTGAGTTGGTTGAACTAAGCAGGGAGGGTGCGTTCCATATGGTTATCAGTCATTTTAGTAATGAAAGTTCCCGTATCATAACGGAACTTCACTCTCATCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTAATTTGAGAAAGGATGATACTATGAATCCTCTTAATGGAAGGCAGGTTAAGGATCACCCACAAGGAGTCAGAGATTACTTAGAGAATATATCTAATTTCCCCAAGTACATGCGTGAAAATCCTATTCAAGTGCCTGATGATCTTATTGAGCTGTACCTTGAGTTATTATGCAAGTACGAAGGTGGTTCAGTTCTCAAGTTTCTGGAAATGTTTGATAGCTATCGAGTTGAACATTGTTTACGCCTGTGCCAAGAATATGGCATTATAGATGCATCTGCGTTCTTATTAGAAAGGGTTGGTGATGTTGGTAATGCTCTTTCACTTACACTTTCTGATCTAAATGATAAATTTGTTGAGCTTGATGCTGCTGTGGAAGCTGTAGTTTTAAACCATCGCAGAGTTGGTTCTTTGCATATGGAAGTATTCAACAGTGTTTTAAGAACAAAGGAGGTAAGTGACATCCACAATTTATTGCGTGCCTGTATTGGTCTGTGTCAACGGAACACCCCTCGTCTAAATCCTGAGGAGTCAGAGGCACATTGGTTTAAATTACTTGACTCCTTTTGTGACCCATTGATGGATTCAAATGTTGAAGAAAGAGCATATGAAAGTAAAAATTACTTTGGAATGCTAGCTGGATCAGCAGATTCACAACAGGACAAAGACACCCATAAAAGCAGTTGGAAAATTTCGAAGTCCCGGAATGGTCATATCTTGAAAAAATTGCTATCCCAGTTCATTAAAGAGATTGTTGAGGGAATGATTGGTTTTGTTCACCTTCCAACTATCATGTCTAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGTGATTTTAAACTTACCATATTGGGAATGCTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAATCGTTAATAGAGGATGATTCTTTTTATACTATGAGTTTACTCAAAAAAGGGGCCTCCCATGGATACGCTCCCAGGAGTCTCGTGTGCTGTATTTGTAATTGCCTCCTCGCAAAGAACTCTGTTAGCTCTGGAATTCGGATTTTCAACTGCGGCCATGCAATTCATCTCCAATGTGAAGTTTCAGAAATTGAGGCATCGAGCAAAGGATCTTCATCTGGATGCCCTGTATGCATGCCTAACCAAAAATCCCAGCAGTCAAGAAACAAATCAATCATTGCAGCAAATGGCTTGGTCAATAAATTCTCATCAAGGCGCCAATACCCCCATGGAAGTACCATTCATCCTCATGACAGTGATTTATCAGATAATATGTATGGACAGCAACAGATATCACGGTTTGAGATCTTGAGCAGCTTGCAGAAGAATCAGAGATTTATGCAAATAGAAAACTTGCCTCCGTTGAAGCTTGCACCACCTGCTGTGTACCATGAAAAGGTAAGTAAAGTGGCAAACTTTCTGACCGGCGAAAGTAGCCATAGTTCTGGTGCTATTGAGAAACAAAGTAGAAACAAGCAAAACCGGGAGCTGAGAGTTAAGGGTTCATCAATTCGATTTCCTTTAAAATCAAGTATATTTGGCAAGGAGAAGACAAATAAGCGGTGA 5757 0.4346 MELDLRSFLHSPTSTSSSDADGDDAPHRTIDDILNDCDTSSSSPSPPSSPSHSLTNNSHPQNPTLQQKPLQPAPDSFSRVKPAEFSDRTRVSRPFSSLLHGVRSNAKPGAALAAAAAASRSVPTPHAAAILSRRKSAAVNSAESSSIAATGDDSSDVSSSKGELGEPSEKFDPVPQKIETQSSESASAIGERFESDAEIATDLTAGSADIQVHSDNDNYNGNDNDNGNGNDNDNDSPIVSEDKRDLDEVGRDHEKDMNSAPFDDDDREFDGNDGGDERITATDAAVEAEEEVVNNGSSSMEDVKNEVSAAGGDEGSSLGDVAELVEERLEELESRRAAKRAEKKRESLMKPLELAEELEKKRASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNAFTRAISSQTFRREQGSTRALAVHANYIAVGMSKGLIVVFPSKYSIHHADNSDGKMLMLAIQGDRLHAPVTSMSFNQQGDLLLAGYGDGHLTLWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLFHIISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFTQGNTSAPASSISSMMGGVVGGDAGWKLFNEAPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAWKYMTQTCSSTENTSAEAVERVSLLAIAWERKVLVAKLVKSELKVYGRWSLDGAAIGLVWLDDQMLVVLTSSGQLYLFSKDGTVIHQTSFAGDGIGGDDLVSYHTHFINIFGNPEKAYHNSVAVRGASIYILGPTHLLVSRLLPWKERISVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKLDQSNYSNSRSNSVHSEIKEQYARVGGVAVEFCCHIKRTDILFDEIFSKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGTIPPTRLPSLRRELVEFLLKDSCTPKSHTVSDSVSRRPHLNLYLLLKLDTEATLDVLRCAFMEDEISNASSSSPDSANKPIEEAEKENDNVTETQNVLVQNTVDALIQIIDMNIVPTDTTSSSGDDGLIKEWPSKDIGYLFEFIAYYVALQRAKISKGVLCQILEYLTSDSHFSTNVSVHCSTPKNREKQVLALLEVLPESDWDASFVLDLCERAKYHQVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFIDKAFSQLTDNDHAAFRSAVILRIPELVELSREGAFHMVISHFSNESSRIITELHSHPRSLFLYLKTLIELHLFGTLDLSNLRKDDTMNPLNGRQVKDHPQGVRDYLENISNFPKYMRENPIQVPDDLIELYLELLCKYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGNALSLTLSDLNDKFVELDAAVEAVVLNHRRVGSLHMEVFNSVLRTKEVSDIHNLLRACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSNVEERAYESKNYFGMLAGSADSQQDKDTHKSSWKISKSRNGHILKKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCICNCLLAKNSVSSGIRIFNCGHAIHLQCEVSEIEASSKGSSSGCPVCMPNQKSQQSRNKSIIAANGLVNKFSSRRQYPHGSTIHPHDSDLSDNMYGQQQISRFEILSSLQKNQRFMQIENLPPLKLAPPAVYHEKVSKVANFLTGESSHSSGAIEKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00582 1918 Pfam Region in Clathrin and VPS 1444 1512 IPR000547 GO:0006886|GO:0016192
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 132 302 - -
Pumo7g00582 1918 Coils Coil 1912 1918 - -
Pumo7g00582 1918 Coils Coil 1147 1167 - -
Pumo7g00582 1918 SUPERFAMILY WD40 repeat-like 409 754 IPR036322 GO:0005515
Pumo7g00582 1918 CDD RING-H2 1727 1776 - -
Pumo7g00582 1918 Coils Coil 322 349 - -
Pumo7g00582 1918 PANTHER VACUOLAR PROTEIN SORTING VPS41 285 1848 IPR045111 GO:0006623
Pumo7g00582 1918 ProSitePatterns Trp-Asp (WD) repeats signature. 481 495 IPR019775 -
Pumo7g00582 1918 ProSiteProfiles Trp-Asp (WD) repeats profile. 469 503 IPR001680 GO:0005515
Pumo7g00582 1918 Pfam Golgi CORVET complex core vacuolar protein 8 943 1127 IPR025941 -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 207 235 - -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 1 109 - -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 1874 1900 - -
Pumo7g00582 1918 SUPERFAMILY RING/U-box 1720 1778 - -
Pumo7g00582 1918 Gene3D - 385 543 IPR015943 GO:0005515
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 236 265 - -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 137 162 - -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 175 189 - -
Pumo7g00582 1918 ProSiteProfiles Zinc finger RING-type profile. 1727 1775 IPR001841 -
Pumo7g00582 1918 MobiDBLite consensus disorder prediction 35 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00582 K20178 - gmx:100780869 3365.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00582 7 9288857 9301725 Pumo7g00582 7 9288857 9301725 ECH