Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00560 ATGGGGGGAAAGAGGAAGAAGAGCGATGATGATTCAGGCAACTATGATGATGTGGAAGCAGAAGGAGCATCTTCGAAGAAGAAAACGAGAACGACGCCGGAGAAGGAGAAGAAGGAGCAATTGCGTCCTTCGATGATAAAGAACAAGGAGAAGAGATCGGAGGTGCACGCGAAGCTCAAGCACCAGAAGAAGCTCGAGAAGCGCGCCAAGGCCAAGGCTCGGGACGCTGCTCTCAAGAGAGCTCTCGAGCTCGGTGAGGAGCCTCCGGAGAAGAAGGTTCCTCGCACCATTGAGAACACGAGGGAATTAGGACGAGACCGTTTGCAAGCCCGACGACGAAGAGGTTTTGAACTTTTGATTATTAATCTCGAAAATGAGGCTTTGTTGTGCATTTTATTTGCTGGAAATGATGCTGATGAATTCAGTTCAATTTTGAATCAACAACAAACTCCCAAGATATTAATCACCACTTGCCGCTTCCATTCTACTAGGGGACCTGCTTTTATATCGGAGTTGCTCTCAGTTATACCAAATGCACATTACTTCAAGAGAGGAACATATGATCTGAAAAAGATTGTAGAATATGCAAAGAAGAAGGACTTCACTTCTGTTATAGTTGTTCACACCAATCGTAGGGAACCGGATGCTCTTTTAATCATTGGTGTACCTGATGGGCCTACTGCTCATTTCAAGCTCTCGAAGCTTGTTTTGCGCAAGGATATCAAGAATCATGGAACTCCAACCGGTCACAAGCCCGAGCTTGTATTGAATAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGGTTGATACAGTCACTTTTCCCACAAGATCCAGAATTTAAAGGCCGGCGAGTAGTCACTTTCCACAACCAGAGAGACTTCATATTCTTTCGGCATCATCGGTACATTTTTGAAACCAAAGAAGTTAAAAAAGCAGAGTCTAAAGGTAAAAAGGACAAAGATAGCAAGAGTGAGAATGTTCCTGAACAGAAAACAATTGCCCGACTTCAGGAATGTGGCCCTCGTTTCACATTAAAGTTGATTAGCCTGCAGCATGGAACATTTGACACCAAGGGTGGGGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTTTATCCGGTGAAGAGGGTTAGTTATCTTGAGGTGGTTGGGATCTTTCAACCTGTTTACTTAATTCTGAGTCCTATCATCTCTGTAAGCCAGTGA 1227 0.4474 MGGKRKKSDDDSGNYDDVEAEGASSKKKTRTTPEKEKKEQLRPSMIKNKEKRSEVHAKLKHQKKLEKRAKAKARDAALKRALELGEEPPEKKVPRTIENTRELGRDRLQARRRRGFELLIINLENEALLCILFAGNDADEFSSILNQQQTPKILITTCRFHSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLIIGVPDGPTAHFKLSKLVLRKDIKNHGTPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKAESKGKKDKDSKSENVPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFYPVKRVSYLEVVGIFQPVYLILSPIISVSQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00560 408 SUPERFAMILY Class II aaRS ABD-related 151 354 - -
Pumo7g00560 408 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 43 379 IPR044281 GO:0006364|GO:0042134
Pumo7g00560 408 FunFam Ribosome production factor 1 151 347 - -
Pumo7g00560 408 Pfam Brix domain 166 349 IPR007109 GO:0006364|GO:0019843
Pumo7g00560 408 ProSiteProfiles Brix domain profile. 151 357 IPR007109 GO:0006364|GO:0019843
Pumo7g00560 408 SMART Brix_2 154 351 IPR007109 GO:0006364|GO:0019843
Pumo7g00560 408 MobiDBLite consensus disorder prediction 20 55 - -
Pumo7g00560 408 Gene3D - 151 347 - -
Pumo7g00560 408 MobiDBLite consensus disorder prediction 1 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00560 K14846 - gmx:100791194 576.63