Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00558 ATGATCTCAAGTGAAAGAAATGTTTTTGGCACCAAGGGGAAAACGGGTATAGATTTCATGGTTTTGGTGTTACTAGTCTCATGGTTTTGTTTGACTACTATATGTGTCTCAGCTACAAAACAAGCATACCCACCATCACCACAACCAAACCAGAACCTAAGGTTTGGCCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAAATGGCAAGACCACACCTTGCTTGGATGTGCTCCCTTCCCAGAATATTTCTTGCTCTGACCTCAACACCACTGTTTTTATTAACAGAATGATCCAAGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATCTTCGGGTTTGATTCCTCGGATTCAGCTAAATCATTGGATGCTGCATTTGCTCCTGCAATTGCAGCAAACATTCCTTGGGTAGCTGTTTTGGGCAACCATGACCAGGAAGGAACCCTCTCTAGGGAAGGGGTGATGAAACATATTGTTGGGATGAAAAACACCTTATCTAAATTCAATCCTCCAGAAGTGCATATCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCACTGGTTTTGAAAATAAATCAGTGCTCAACCTGTACTTTCTTGATAGTGGAGATTATTCCAAAGTAGCTCCTCCAATTTTTGGTTATGATTGGATCAGGCCCTCCCAGCAACTTTGGTTCCAACGAACATCTGCAAAGCTTAGGAAAGCATACAAAAGTGGACCAGTGCCTCAGAAAGATGCTGCTCCTGGTCTTGCATATTTCCACATCCCTCTACCAGAATATGCTAGTTTTGACTCATCAAACATGACAGGTGTGAAACAGGAACCGGATGGCAATGGCATTAGCTCTCCTTCTGTGAACTCTGGCTTCTTCACAACCTTGGTTGAAGCAAGAGATGTGAAGGCAGTTTTCGTTGGCCATGATCACCTCAATGACTTCTGCGGCAAGCTAATGGATATACAACTTTGTTATGCTGGGGGATTCGGATACCATGCGTATGGAAAGGCGGGGTGGCCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGGAGAAAACCGCGAAAGGAAGTTGGGGAGATGTCAAGTCAATTAAAACATGGAAACGCCTTGATGATAAAAATCTTACTGGAATTGATGGCGAGGTCCTCTGGAGCAAGAGCTCTGGTGGTAAGATATCCTGTGATACTTGTAGTAGTAGTACTATTCTTCTTGTTCTTAAACTGTGCTTCAGACTGAAAAGGATGGAATCTATCTTTGGAATTGTCTATAAGATATGCCAGTTGGACATACAGAAAATGAAAAATTAG 1344 0.4263 MISSERNVFGTKGKTGIDFMVLVLLVSWFCLTTICVSATKQAYPPSPQPNQNLRFGQNGEFKILQVADMHYANGKTTPCLDVLPSQNISCSDLNTTVFINRMIQAEKPNLIVFTGDNIFGFDSSDSAKSLDAAFAPAIAANIPWVAVLGNHDQEGTLSREGVMKHIVGMKNTLSKFNPPEVHIIDGFGNYNLEVGGVEGTGFENKSVLNLYFLDSGDYSKVAPPIFGYDWIRPSQQLWFQRTSAKLRKAYKSGPVPQKDAAPGLAYFHIPLPEYASFDSSNMTGVKQEPDGNGISSPSVNSGFFTTLVEARDVKAVFVGHDHLNDFCGKLMDIQLCYAGGFGYHAYGKAGWPRRARVVVASLEKTAKGSWGDVKSIKTWKRLDDKNLTGIDGEVLWSKSSGGKISCDTCSSSTILLVLKLCFRLKRMESIFGIVYKICQLDIQKMKN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00558 447 PIRSF Ptase_At2g46880 9 396 IPR011230 -
Pumo7g00558 447 FunFam Probable inactive purple acid phosphatase 29 60 374 - -
Pumo7g00558 447 Gene3D - 60 367 IPR029052 -
Pumo7g00558 447 CDD MPP_Dcr2 59 347 - -
Pumo7g00558 447 Pfam Calcineurin-like phosphoesterase 61 323 IPR004843 GO:0016787
Pumo7g00558 447 SUPERFAMILY Metallo-dependent phosphatases 58 373 IPR029052 -
Pumo7g00558 447 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 26 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00558 Pumo-Chr7 8658162 8662366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00558 - - gmx:100794167 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00558 7 8658162 8662366 Pumo7g00558 7 8658162 8662366 ECH