Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00542 ATGAGAGAGCCAAGAGATGGAGTCAGGAGCGATAGCAGCAAGCTCTCCAAAGCCGCAGCACCGGCTCAGTCCTTCCCTCTCATTCTCGACGTCGACGATTTCAAGGGAGACTTCTCGTTCGACGCGTTGTTCGGGAACCTCGTGAACGAGCTTCTTCCGACGTTCAAATTGGAGGAAGCGGAATCGGACGGCTGGCGATTCGCTGCCGAACGGGCATCTCCGAGCGCCGTCCGATGCGTCCAAATTGATGGGAGACTCTACAATCTTAAGAAAGATGTTTCAGTTCAAGACTCTAAGCATCGGAAGACACTTGCTGAGCTAGAGAAAGGTGTGGATGGATTGTTTGATAGCTTTGCGAGGTTGGATTCACGAATTTCAAGTGTTGGTCAGACAGCTGCAAAGATAGGTGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACCGCCAGTCAAACAATTGAGTTGATAAAATACTTAATGGAGTTCAATAGCAGCCCAGGCGACCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCGATTGCCCAGAAATTACGGTCATTTGCTGAAGAAGATATCGGAAGACATGGAATACCTGTCCCATCAGCTATGGGAAATGCAACTGCTAGCAGAGGATTAGAAGTTGCAGTTGCTAATTTACAGGACTACTGCAATGAACTGGAGAATAGATTGCTTTCTCGGTTTGATGCAGCATCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGTACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTCATCGATGTGGAAGTAATGAATGCAGACACTAAGTTGGTTCTTGGTGACCAGGCTGCCCAAGCTAGTCCTAGTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATTACAGATACTGTTCGTAAAGAGGCTGCAACAATCACAGCTGTATTCCCTTCCCCAAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAATCACTGCCCTTTTGGACAAATTGTTAGAGAAACCATCTCTTGTCAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCCGTGGCATATGAAAAGACCCAAGAACTAGCAAGAGATCTACAAGCTGTAGGATGTGGTGACTTGGATGTTGAGGGTCTAACAGAGTCCCTATTTTCAACTCACAAAGATGAATACCCTGAATATGAGCAGGCATCTCTTAGGCAATTGTATAAAGTGAAGATGGAAGAATTGCGAGCTGAAAGCCAGCAGATTTCTGATTCATCTGGGACAATTGGACGCTCAAAAGGAGCTTCAGTAGTTTCATCTCAACAGCAAATATCTGTTACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTGCTTCCCAGCCTGCTATACTTGCAACCCATGTAAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGATGGGCTTGAACGGGCTAGAGACTGCCTGACTGAAGCTGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTACCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCGGCTGCTGCTGCTGGTGAAAGTAGTTTCAGATCTTTCATGATTGCTGTACAACGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCTAATTCTATATCTCGGCTTTTGCTCCCTGTCGATGGTGCACATGCTGCTGCTTGTGAGGAAATGGCTACAGCAATGTCAAGTGCAGAGGCCGCTGCTTATAAAGGATTACAACAGTGCATTGAAACTGTCATGGCTGAGGGGAACCGCTTGCACAAGGTGCTACTAAACCATTGGCAGAAGTATACTTTTAATCCAAGTGGGGGATTGCGACTGAAGCGTGACATTACTGAATATGGAGAATTTCTGCGTAGTTTCAATGCTCCTTCTGTTGATGAAAAGTTTGAATTGTTGGGCATAATGGCCAATGTATTTATTGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGCACACCCAGCATACGGAAAGATGCGCAAAGATTTATTCAACTTCGGGATGACTACAAGGCTGCCAAACTTGCGTCCAAACTGAGTTCCCTGTGGTCTTAA 2220 0.4545 MREPRDGVRSDSSKLSKAAAPAQSFPLILDVDDFKGDFSFDALFGNLVNELLPTFKLEEAESDGWRFAAERASPSAVRCVQIDGRLYNLKKDVSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIPVPSAMGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTKLVLGDQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRITALLDKLLEKPSLVNLPSMEEGGLLLYLRMLAVAYEKTQELARDLQAVGCGDLDVEGLTESLFSTHKDEYPEYEQASLRQLYKVKMEELRAESQQISDSSGTIGRSKGASVVSSQQQISVTVVTEFVRWNEEAISRCNLFASQPAILATHVKAVFTCLLDQVSQYIADGLERARDCLTEAANLRERFVLGTSVTRRVAAAAASAAEAAAAAGESSFRSFMIAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFLRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLRDDYKAAKLASKLSSLWS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00542 739 Coils Coil 217 237 - -
Pumo7g00542 739 Pfam Exocyst complex component Sec10 463 635 IPR009976 GO:0005737
Pumo7g00542 739 Pfam Exocyst complex component Sec10 112 449 IPR009976 GO:0005737
Pumo7g00542 739 Pfam Exocyst complex component Sec10 637 733 IPR009976 GO:0005737
Pumo7g00542 739 PANTHER SEC10 27 636 IPR009976 GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00542 Pumo-Chr7 8488257 8500477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00542 K19984 - gmx:100820430 1167.53