Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00539 ATGCGGAAATCCGCTGCAGACAGATTCAGACACCTTTTCAACCGTTCACTCGTTCTTCTGCGCCACCGTCACCATCATAATCAGCATCCCTTTCCTTCTTCTTCTTCTCCTGTCTTTTCCCTCTCCCCATTTTCTCGCTCTCGTTTCTTGTCTTCTACTCCCTTTTCCATGGCTTCTGATACCCCTTTCCCTGTCACCGTTCAAAACCTCAACCCCAAGGTTCTGAAATGTGAGTATGCTGTTAGAGGAGAGGTTGTCACACTTGCCCAGAATTTGCAAAAGGATTTACAGGCCAATCCAGGCTCTCATCCATTTGATGAGATACTTTACTGCAACATTGGAAATCCCCAGTCTCTTGGCCAGCAGCCAATAACATTTTTTCCGAGAGCAAAATTCAAATTAAGCAATGCTTATTATGACTATCTCATCTCTGCCAGTACCGACGCAATACAGCGAGCTTGGCAGATCGTGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGCCATAGTCAGGGTGTCAAGGGCTTGCGTGATACAATAGCTGCTGGAATTGAAGAGCGTGATGGTTTTCCTGCCAATCCCGATGACATTTTCATGACAGATGGTGCAAGCCCTGCAGTCCATAATATGATGCAATTGCTCATTAGATCAGAAAATGACGGTATTCTTTGTCCCATTCCACAGTACCCTCTGTACTCAGCCTCAATTGCCCTCCACGGTGGCTGCCTGGTACCTTATTATCTGGATGAAGCAACGGGTTGGGGATTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATCGATGTTAGGGCTTTAGTTGTTATCAATCCTGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAGCGGGATATAGTAGAATTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTATATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGTTATGGTGAGAATGATATCACCTTGGTATCTTTCCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTGCAGAAGTGAGGGAACAAATATATAAAGTGGCATCGGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTAACTCCTTGCATCTTTAA 1242 0.4509 MRKSAADRFRHLFNRSLVLLRHRHHHNQHPFPSSSSPVFSLSPFSRSRFLSSTPFSMASDTPFPVTVQNLNPKVLKCEYAVRGEVVTLAQNLQKDLQANPGSHPFDEILYCNIGNPQSLGQQPITFFPRAKFKLSNAYYDYLISASTDAIQRAWQIVDQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIALHGGCLVPYYLDEATGWGLEIPELKKQLEAAKSKGIDVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVNSLHL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00539 413 Gene3D Aspartate Aminotransferase, domain 1 63 127 IPR015422 GO:0003824
Pumo7g00539 413 Gene3D - 166 411 IPR015421 GO:0003824
Pumo7g00539 413 SUPERFAMILY PLP-dependent transferases 68 406 IPR015424 -
Pumo7g00539 413 CDD AAT_like 153 406 - -
Pumo7g00539 413 FunFam alanine aminotransferase 2 166 411 - -
Pumo7g00539 413 FunFam alanine aminotransferase 1 63 124 - -
Pumo7g00539 413 Pfam Aminotransferase class I and II 160 409 IPR004839 GO:0009058|GO:0030170
Pumo7g00539 413 PANTHER ALANINE AMINOTRANSFERASE 58 408 IPR045088 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00539 Pumo-Chr7 8451190 8457049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00539 K00814 - gmx:100776235 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00539 7 8451190 8457049 Pumo7g00539 7 8451190 8457049 ECH