Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00490 ATGAGCGTTTTGCAAGGGAAACGCAAGCGCCAAGACCTGGCTTCGACGCTGTCGGCCTCAATGAGCAAGGAGGAGCACGCTTTGTACAACATCATTCAGGGGAGGAAGGAGATGGGGATATGGCAAGGGGACCTCAAACGCGAAACCAACATTCCCGACAGTTTGTTGAAGAAATCCATCAAGATGCTTATCACCAAGAAACTCATCAAGGAGGTTGTGAACGTCCAGAACAAGTCCAAGAAGTTGTTGATGGGGACGGATTTCCGACCCTCCGATGAGATCAGTGGTGGAGAGTGGTACACTGAAGGCAAACTCGACACGGGATTGATTGATGCTCTGTCTGAGGTTTGCGAGAAGATCATACGTCGCCAGAAGGTCGCGACTTGTGAGGGGATCCTTGAGTGGATTAGGAAGGTGGGGAGTAACATCTTCCCTGGTGGAGTCAGTAAAGGGCAGCTGGAGCAGATTTTGAAGAATTTGGTTATGGAGAATAAGTTGCAGGAGGTGACTAGTACTGGCTTTGGGGATTTTGAGTCTGTTCCTGTTGGTGAAGTTTGTTATAGATTGGCGGAGAAGGCGGCTGGTGGTGCCATGGCTTCTATTCCTTGTGGGGTTTGTCCTAGGATTAATTATTGTACACCCGATGGTGTTATCTCCCCAACAACTTGTCAATATTTTCAGAAATGGTTGGACTTCTAA 699 0.4835 MSVLQGKRKRQDLASTLSASMSKEEHALYNIIQGRKEMGIWQGDLKRETNIPDSLLKKSIKMLITKKLIKEVVNVQNKSKKLLMGTDFRPSDEISGGEWYTEGKLDTGLIDALSEVCEKIIRRQKVATCEGILEWIRKVGSNIFPGGVSKGQLEQILKNLVMENKLQEVTSTGFGDFESVPVGEVCYRLAEKAAGGAMASIPCGVCPRINYCTPDGVISPTTCQYFQKWLDF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00490 232 Pfam RNA polymerase Rpc34 subunit 18 126 IPR007832 GO:0005666|GO:0006383
Pumo7g00490 232 Gene3D - 3 80 IPR036388 -
Pumo7g00490 232 FunFam DNA-directed RNA polymerase III subunit RPC6 22 87 - -
Pumo7g00490 232 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 18 232 IPR016049 -
Pumo7g00490 232 SUPERFAMILY "Winged helix" DNA-binding domain 18 87 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00490 Pumo-Chr7 7828030 7829356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00490 K03025 - gmx:100810279 382.874