Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00480 ATGAGACCCCCTTTTGTTGGATTCACCAGAATACTTGTGCTTCTTGTTTTCGTCTCTGCTTGCTGTTCTTCTACCCATGGAAGTATGGAAACAGAGAAAACTTTAGCGATTATAAAACCTGATGGATTGCTTGGTAACTACACAGATGATATCAAGAGAACAATTGAAGAATATGGTTTCAGAATTTTGAAGGAAAAGATTGTTCAACTTGATAAGGCCACTGTGAAAAGTTTTTATGCTGAGCACTCTTCAAAAAGCTTCTTTTCCAGCCTTATAAAATACATGACGAGTGGACCAGTGTTAGTAATGGTCTTGGAGAAGGATAATGCTATTGCTGATTGGCGTGCTTTAATGGGTCCTACTGATTCAAGCAAGGCTAAGATTACTCACCCTCACAGTATCAGAGCAAAATGTGGATTGGATATGGAAAAGAATTGTGTTCATGGTTCAGACTCTCCCAAATCTGCGCAAAGAGAGATATCATTTTTCTTCAGAGAGCTCTCTGCAGATGTGGCTGCTGAGCATGATGAATTGTAG 537 0.3948 MRPPFVGFTRILVLLVFVSACCSSTHGSMETEKTLAIIKPDGLLGNYTDDIKRTIEEYGFRILKEKIVQLDKATVKSFYAEHSSKSFFSSLIKYMTSGPVLVMVLEKDNAIADWRALMGPTDSSKAKITHPHSIRAKCGLDMEKNCVHGSDSPKSAQREISFFFRELSADVAAEHDEL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00480 178 FunFam Nucleoside diphosphate kinase 7 29 170 - -
Pumo7g00480 178 Gene3D - 22 175 IPR036850 -
Pumo7g00480 178 PRINTS Nucleoside diphosphate kinase signature 34 56 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Pumo7g00480 178 PRINTS Nucleoside diphosphate kinase signature 98 115 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Pumo7g00480 178 PRINTS Nucleoside diphosphate kinase signature 78 97 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Pumo7g00480 178 PRINTS Nucleoside diphosphate kinase signature 145 164 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Pumo7g00480 178 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pumo7g00480 178 Pfam Nucleoside diphosphate kinase 32 166 IPR034907 -
Pumo7g00480 178 ProSitePatterns Nucleoside diphosphate kinases active site. 145 153 IPR023005 -
Pumo7g00480 178 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 13 173 - -
Pumo7g00480 178 SUPERFAMILY Nucleoside diphosphate kinase, NDK 29 167 IPR036850 -
Pumo7g00480 178 SMART ndk_5 31 171 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00480 Pumo-Chr7 7704704 7712989 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00480 K20790 - gmx:100500470 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00480 7 7704704 7712989 Pumo7g00480 7 7704704 7712989 ECH