Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00469 ATGGCCCTTACAAAACAAATCATGGGTTCTTCATTGCTAGAGAGGTCCTGGTTTGTTCCTTCTTCTTCTTCCCCTTCATCACTTTTGAACCAAACTCGGTTCTTTGTTCCTTTGGAGAACAAGAGAGTTTTGAGGGTGAAGAAGGCTGCAAAGTTTCCTGTGGCAGCTATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTCCTTCTCCTTCATCATCACCATCCTCTTCCACTTCTGTGTCTACAGAAAAACCGGTGAAATTCAAGGTTAGAGCTGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATTGTGAAGCATATTGATGCTCTTACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGCACTGAGATTGATCCAAATATGTACGCAGAGAGTCGTGTGGAGAAGCCACTGCCTATGTATGTGCCAAGAGATGAACGTTTTGAGGAGTCTAAGCAGAACACATTCTCTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATTCCGGGTCTTAAGGCTAGCCTTTCTGCTAGCAACCAAGACTTCAATGAATTCAAAGATGTTGATGGCCTTTACAGTGAAGGGTTGCTCATAAAGTTGGGATTGCAAGATGATGTGTTGAAGAAAATTCCATTTGTCAGCAAAATCCAAGAGTCCAGCCAGGGACTTCTTAAGTTTGACACCCCTAAGATTATTTCCAGCTTCCAAGTTCCAAGTATGATTTTGAAGCAACATGTTACAAGTTAA 774 0.4225 MALTKQIMGSSLLERSWFVPSSSSPSSLLNQTRFFVPLENKRVLRVKKAAKFPVAAISEDLMKGSSSPSPSSSPSSSTSVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDALTDRIGRNVVLELVSTEIDPNMYAESRVEKPLPMYVPRDERFEESKQNTFSVKRLKAVLHNLIPGLKASLSASNQDFNEFKDVDGLYSEGLLIKLGLQDDVLKKIPFVSKIQESSQGLLKFDTPKIISSFQVPSMILKQHVTS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00469 257 PANTHER LIPOXYGENASE 134 242 IPR000907 GO:0016702|GO:0034440|GO:0046872
Pumo7g00469 257 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 78 257 IPR013819 GO:0016702|GO:0046872
Pumo7g00469 257 Gene3D PLAT/LH2 domain 75 164 - -
Pumo7g00469 257 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 88 138 IPR036392 GO:0005515
Pumo7g00469 257 SUPERFAMILY Lipoxigenase 134 242 IPR036226 -
Pumo7g00469 257 Pfam Lipoxygenase 135 243 IPR013819 GO:0016702|GO:0046872
Pumo7g00469 257 Gene3D - 165 243 IPR027433 -
Pumo7g00469 257 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00469 Pumo-Chr7 7529578 7532540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00469 133 242 Acyl Lipid Metabolism Gene Families AT1G72520 65.487 7.83e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00469 K00454 - gmx:100793614 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00469 7 7529578 7532540 Pumo7g00469 7 7529578 7532540 ECH