Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00465 ATGGCGGTTTCTACGATAGCCTTGTACGCGAGTCCACCGAGCAGCGTGTGTTCAACGCCGCACCAGATCAACGCCCACGCTAGCTACGACTTCGAATTGGGGTCGCGATCTTCGTCGCCGGCGGGGTCGACGGCGCCGCCGTCGACGTCGCAAAAGCCGGTGATGGGCGGGCTCTCGTGCTTGTTCTCGTCGCCGGCGCCAGCGGTGAAGCACGCGCCGCTTTCGTCGAACTTTTCCGGTGAGGAGGATGAGATGAAGGAACTCAGCAGTTCCTTCTCGTATTCTCCGAGCAAATTTGCTGGTTCTTCATGGAAGAGGGATCAGAGTCCTGTGTCGGTGTTTCATGGTCCTGTGTCGTGTAGCAGTAGTGGTAGAAGTTCCACAGGTTCAACCTCTGTTGTGAGGAGTATCCGAGGTGGGACTAGTGGGTTGTTTGATGGGTTTGTGAGGAATGCGTTGGGGTCTTCTTGTTTAGACTATGACTTAGATGCGGGTGATTCTTCTGCTATGGTTGATGAGTTAACCTTCAATTTGGAGGATAATTTCGTGGAGGCTGGGTTTCACTTTGAGCCCTATGCTAAAAAGTTGCTTCTTGGGGCGCAGTTGAGGCACAAGATCTTCTGTGAAGAGTTTGTTATCAAGGCCTTTTGTGAAGCAGAGAAAGCACACAGAGGGCAGATGCGGGCTAGTGGGGATCCTTACTTGCAGCATTGTTTGGAGACTGCTGTGTTGCTGGCTTTGATTGGTGCCAATTCCACTGTTGTGGCTGCGGGGCTATTGCATGACACGCTGGATGATGCTTGTCTGACTTATGATTATATATTTGGGACGTTTGGAGCTGGTGTTGCTGATTTAGTTGAAGGGGTTTCTAAACTGAGCCACTTAAGCAAGCTAGCTCGAGAAAATAATACAGCTAGCAAGTCAGTTGAAGCAGACCGCTTGCATACTATGTTCCTTGCCATGGCAGATGCAAGAGCTGTACTCATTAAATTGGCAGATCGGTTGCATAATATGATGACACTAGATTCATTGCCAGTGGCCAAGCGACAAAGGTTTGCTAAGGAGACTTTGGAGATTTTTGCGCCTTTGGCCAATCGCTTAGGAATTTCTAGCTGGAAGGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAAGCCAGCATGAGGAGCTTTCATCAAAGCTTGTGGAATCATACGATGATGCAATGACTACTTCTGCAATAGAGAGATTAGAGCAAGCACTTAAAGATGAAGGCATTTCTTATAATGTCATTTCTGGGCGGCATAAGAGCTTGTATAGCATTTATTGCAAAATGTTAAAGAAGAAACTAACCATAGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGACAAGGAAGAAGACTGTTACAAGGCCTTAACAGTTGTTCATCGATTATGGTCTGAGGTGCCTGGAAAGCTGAAAGATTACATATGTCGTCCCAAGTTCAATGGATATCAATCTCTGCATACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGGACCAAAGATATGCATTTACAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGATTGTCAGCATTCTTCATTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAGAGATTGTTCGTCTATTGGATATGCTGATTCAGTCAAGCCCCCATGCAAGTTCCCTTCCCATGCTGCTGATTGCCCATATTCTTATAAGCCTGATTGTGGTCAGAATGGGCCTGTGTTCGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTTAGTGCGAACTCAACCATATTGGATTTGCTGGAAAGAGCTGGGCGTGCAAGCTCTAGATTGACAACATATAGGTTCCCATTGAAGGAAGAGTTGAGGCCAAGGATGAATCATAAGCCTGTGAGTGATCCCAATAGCAAGTTGAAGATGGGGGATGTGATTGAACTTACACCAGCCATACCTGACAAGTCTCTTACAGAATATAGGGAAGAAATCCAGCGTATGTATGATCGAGGGCTAACTGTATCAAGCATGGGAACTGCTGCAAGCACCATGGTTGGCTCAAGAAGTTGA 2145 0.4648 MAVSTIALYASPPSSVCSTPHQINAHASYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSCLFSSPAPAVKHAPLSSNFSGEEDEMKELSSSFSYSPSKFAGSSWKRDQSPVSVFHGPVSCSSSGRSSTGSTSVVRSIRGGTSGLFDGFVRNALGSSCLDYDLDAGDSSAMVDELTFNLEDNFVEAGFHFEPYAKKLLLGAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDACLTYDYIFGTFGAGVADLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDSLPVAKRQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMTTSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSIGYADSVKPPCKFPSHAADCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTILDLLERAGRASSRLTTYRFPLKEELRPRMNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAASTMVGSRS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00465 714 Gene3D Beta Polymerase, domain 2 388 518 IPR043519 -
Pumo7g00465 714 FunFam GTP pyrophosphokinase RelA 386 518 - -
Pumo7g00465 714 CDD NT_Rel-Spo_like 408 526 IPR007685 GO:0015969
Pumo7g00465 714 ProSiteProfiles S4 RNA-binding domain profile. 654 688 - -
Pumo7g00465 714 CDD HDc 232 360 IPR003607 -
Pumo7g00465 714 ProSiteProfiles HD domain profile. 234 338 IPR006674 -
Pumo7g00465 714 SUPERFAMILY Nucleotidyltransferase 375 565 IPR043519 -
Pumo7g00465 714 FunFam GTP pyrophosphokinase RelA 196 385 - -
Pumo7g00465 714 MobiDBLite consensus disorder prediction 34 53 - -
Pumo7g00465 714 Pfam Region found in RelA / SpoT proteins 428 537 IPR007685 GO:0015969
Pumo7g00465 714 SMART hd_13 230 347 IPR003607 -
Pumo7g00465 714 SMART RelA_SpoT_2 428 538 IPR007685 GO:0015969
Pumo7g00465 714 Pfam HD domain 219 369 - -
Pumo7g00465 714 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 110 680 - -
Pumo7g00465 714 SUPERFAMILY HD-domain/PDEase-like 195 385 - -
Pumo7g00465 714 Gene3D Hypothetical protein af1432 201 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00465 Pumo-Chr7 7439176 7443855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00465 229 535 EF-hand Containing Proteins AT3G17470 29.674 3.24e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00465 K00951 - gmx:100787301 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00465 7 7439176 7443855 Pumo7g00465 7 7439176 7443855 ECH