Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00455 ATGAAGAATATGTTTCTCATTCTCTTGTTTTCCGCTCTTGTTTTTTCATCCACTTGCCATGCTTCTACTGTGAATGATTTCTGCGTAGCAGACCTCAATGGTTCAGAGAGCCCTTCTGGCTATCTCTGCAAGCCACTTAACACAGTAAGATCAAGTGACTTTAAGTACACTTTGCGACCTTCTTCAAACACCCCATTCCCTCCCGCATCCAAAGTTGTAATAAGCCAAGCAACTGTTAACGAGTTTCCTGCTGTCAATGGTCTTAAACTCGCATTAGAACGTGTAGATATCGAAACAAATGGATCTTTTGTATGGCAGGAAAATCCGGGTGGCGATAAAATACTAACCGTGGTTGAAGGTGAAATCCTTTGTGGATTCGTGACATCTACCTCAATTTATTTGAATGCACTGAAAACGGGAGACGTTACGGTTTTCCCAAAAGGACGGTTTCATTATATAGTAAATAATGGTCGTGGGAGAGCTAGTGCTATTGCCGCTTATAATAGCGTAAACCCTCGTCTCCAAGTACTTAATCCCGAATTATCTGCCAACAACGACGACATAATTGCACAAACTACCTCCCTTGATGTTCACCAACTGAAGAAGATTATGGCTCGTTTCACTGCCAGCGGCTAG 636 0.4245 MKNMFLILLFSALVFSSTCHASTVNDFCVADLNGSESPSGYLCKPLNTVRSSDFKYTLRPSSNTPFPPASKVVISQATVNEFPAVNGLKLALERVDIETNGSFVWQENPGGDKILTVVEGEILCGFVTSTSIYLNALKTGDVTVFPKGRFHYIVNNGRGRASAIAAYNSVNPRLQVLNPELSANNDDIIAQTTSLDVHQLKKIMARFTASG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00455 211 CDD cupin_OxOx 20 207 IPR001929 GO:0030145
Pumo7g00455 211 SMART Cupin_1_3 56 201 IPR006045 -
Pumo7g00455 211 Pfam Cupin 73 179 IPR006045 -
Pumo7g00455 211 SUPERFAMILY RmlC-like cupins 24 207 IPR011051 -
Pumo7g00455 211 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 202 - -
Pumo7g00455 211 Gene3D Jelly Rolls 20 211 IPR014710 -
Pumo7g00455 211 PRINTS Germin signature 106 126 IPR001929 GO:0030145
Pumo7g00455 211 PRINTS Germin signature 135 155 IPR001929 GO:0030145
Pumo7g00455 211 PRINTS Germin signature 168 183 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00455 Pumo-Chr7 7303348 7304156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00455 22 211 Miscellaneous Gene Families AT1G72610 35.859 4.79e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00455 - - aprc:113851042 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00455 7 7303348 7304156 Pumo7g00455 7 7303348 7304156 ECH