Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00454 ATGAAGATAATTCACATTCTTTTCCTCTTTGCTCTTCTCTCTTTCACTTCTCATGCTTCTGTCAATGATTTCTGTGTAGCAGACCTAAAAGGTGTCAATGGTCTTGGTGTATCTGCTGCACGGTTAGACATAGCCCAAGGTGGATCAATCCCAATGCACACACACCCTGGTGCCACTGAACTTCTAATAATGGTGGAAGGTCAAATCACTGCTGGCTTTATGACACCAACTGCACTTTATACCAAGTCACTGAAACCGGGAGATGTTATGGTTTTCCCACAAGGACAGTTACATTTTCAGATAAATTCTGGAAACAGAAAAGCCACTGCTTTTCTTGCTTTCAGCAATGCAGACCCTGGAGCACAACTACTTGATCTTCTGTTATTTGGCAACAGCTTGCCTTCTGAGCTGGTTGCACAAACTACCTTCCTTGATGTTGCACAAGTGAAGAAGGTTAAGACTTGTTTTGGTGGCAGAGGCTAG 483 0.4327 MKIIHILFLFALLSFTSHASVNDFCVADLKGVNGLGVSAARLDIAQGGSIPMHTHPGATELLIMVEGQITAGFMTPTALYTKSLKPGDVMVFPQGQLHFQINSGNRKATAFLAFSNADPGAQLLDLLLFGNSLPSELVAQTTFLDVAQVKKVKTCFGGRG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00454 160 Pfam Cupin 18 150 IPR006045 -
Pumo7g00454 160 PRINTS Germin signature 82 102 IPR001929 GO:0030145
Pumo7g00454 160 PRINTS Germin signature 53 73 IPR001929 GO:0030145
Pumo7g00454 160 PRINTS Germin signature 115 130 IPR001929 GO:0030145
Pumo7g00454 160 Gene3D Jelly Rolls 11 159 IPR014710 -
Pumo7g00454 160 CDD cupin_OxOx 26 153 IPR001929 GO:0030145
Pumo7g00454 160 SUPERFAMILY RmlC-like cupins 21 154 IPR011051 -
Pumo7g00454 160 ProSitePatterns Germin family signature. 48 61 IPR019780 GO:0030145
Pumo7g00454 160 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 19 151 - -
Pumo7g00454 160 SMART Cupin_1_3 10 150 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00454 Pumo-Chr7 7274901 7282339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00454 18 160 Miscellaneous Gene Families AT1G72610 56.944 1.10e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00454 - - gmx:100818105 254.603