Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00358 ATGATTGGCAGCTTCAACCAGACTGATTCAATTGAGTGCTGTGAAGCTGAAATGCAGAAGACTGATTCTCAGGAATCTGGTCCTGCCTTGAAGAAGTCAAAAACCAAAATTTTGGCCTCTCAAAATGTAGATAATTGTGAGATGGAAGAAAACAAGGATAAACTTAGTGACATGCCGGATTGTCTTATCCATCACATTTTGTCATTTATGGAAACAAAGGATGCAATTCAAACCTGTGTTTTATCAAAGCGGTGGAGGTATCTTTGGGCTTCAGTTCCCTGCCTGAATTTCAGCAGCAAATCATTCACGCGGTTGGTTGACTTTAAGAAGTTTGTGCAGTGGGTCCTAAACCATCGTGATTCTTCTCATGTCAAACTTCTTGTTTACTACCGCTTTGGGGTAGATTATGCAACAGATCAAGGTCTATTGAATAAGGTTATTGAATATGCAGCATCACATGGGGTTGAAGAAATCAAAGTCAATCTTCGGGCAAAAACCTCTGGCAGTCCACCAGTTGAAATTCCTTTGTCTCTATTTACTTGTCAATCTTTGAAAAAGCTCGAGTTAAAAGATTGCCATCCTACGAATGTGTCATCCCCTTTAGGTTGCAAATCATTGGACATGTTGCATCTGGAACAGTTTTCAATGTATCCTGCTGCAGCTGACTTTTCGAATCCATTTGCAAGTTTGGCAGAACTATTTGGTTTTACAACGTTGACAACTCTGCATCTAAATAACTTCACTCTGTGTTATACAGGAACTGACTGTCTGGATCCATTTGCTAATTGTATCCATTTGAAGAATTTGCACTTAAGTGAAATGTCCTTTAAGTCAGATTTGAACCCTAAGGATTTTGTGATATCTGCCCCTAAGCTCAGTAACTTGAATCTGATGTGCAACTGCTTTAAATGCAAGATTGTAGTTGCTGCACCACAGCTTTCCAATTTCACTTACTTGTATTCTACACCTTGTGCCTTCTTTGAGTTTCGTCTTCCTTCTCTGGATGGCTTGATCATTGATATACATGAACCACGAGATCGATTGGAAAAATGTCGTCGAAGGAAAAGAGAGGAGACTTTACATGGTTTGATCAATATGTTACGGGGACATCATAGTGCAGAAGCTGTTAAACTATCCTTCTGTACAGTTGCGGTTACATGTGGAACTGCAGCCCTGGTAAAGCCAGAATGTTTGCCTTCTAGTAAATTGAAGTCATTGAACTTTGGAGTTGGATCAACATATAAAATCTTCATCAACAACCTTGACCATATAACAGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTCGAGATTGTGACTGTGTAG 1329 0.398 MIGSFNQTDSIECCEAEMQKTDSQESGPALKKSKTKILASQNVDNCEMEENKDKLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFTRLVDFKKFVQWVLNHRDSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKVNLRAKTSGSPPVEIPLSLFTCQSLKKLELKDCHPTNVSSPLGCKSLDMLHLEQFSMYPAAADFSNPFASLAELFGFTTLTTLHLNNFTLCYTGTDCLDPFANCIHLKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNCFKCKIVVAAPQLSNFTYLYSTPCAFFEFRLPSLDGLIIDIHEPRDRLEKCRRRKREETLHGLINMLRGHHSAEAVKLSFCTVAVTCGTAALVKPECLPSSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVTV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00358 442 Gene3D Ribonuclease Inhibitor 144 336 IPR032675 -
Pumo7g00358 442 CDD F-box_AtFBL13-like 55 90 - -
Pumo7g00358 442 ProSiteProfiles F-box domain profile. 52 105 IPR001810 GO:0005515
Pumo7g00358 442 SUPERFAMILY F-box domain 52 107 IPR036047 GO:0005515
Pumo7g00358 442 SMART fbox_2 58 98 IPR001810 GO:0005515
Pumo7g00358 442 Gene3D - 39 95 - -
Pumo7g00358 442 PANTHER OS11G0201299 PROTEIN 236 408 - -
Pumo7g00358 442 SUPERFAMILY RNI-like 173 324 - -
Pumo7g00358 442 Pfam F-box domain 55 92 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00358 Pumo-Chr7 4716995 4718459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00358 53 216 EF-hand Containing Proteins AT5G41840 31.351 8.12e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00358 - - vun:114167379 816.224