Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00310 ATGTTGTTGCCAGCCAGTGGAGTAGGGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAAACCCAGAGGCATCACTTGGTTGTGAGGGGGATGGGGATTGGCGAGGAGATTGATTTAGAAATTGGAGCTGGGGAGGATGATCCGTCATTTGGTAACGCTACTCTAATTGGTGCACCAATGCGGGAATCTTCCGTAGAAGAACATGGTGAGAGCAAGGAGATGGGGATGGTTTCTCAGCTTCCTAATGATGCTCAAGATATGTCCAAGACCCAACAAGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTACGTTGATGTGAAGGATGGGACACCGAGGATTTTCTGCTCTGTCTGCAGGGAGTACGGCCGGAAGCATAGAAGAAATCCATATGGGAATGAGGGCAGTCGTAATATGCAGATGAGTGCCCTGGAAGAACACAACAACAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTCGACAAGCCTGTTTATGTAAAAGTTGCCATGTCAAAAACAGCAGGATCAATTCTTGAAGCTACACTAAAAAGGGATCCCCATGAGGTTGAATTCATTCAGGCAGTCCAGGAAGCTGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGTTATATTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCATGGGTGGATGATAGGGGTGAGACATGTGTGAACCGGGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTGTTGCTAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAAATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCGTCGGAGGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGGATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGATGTGTTGTGAGTGGTTCTGGAAAGATCGCAATGCATGTCTTAGAGAAGCTAATTGCTTATGGTGCTCTTCCCATTTCAGTATCAGATTCTAGAGGATATTTGGTTGATGAGGATGGATTTGACTATATGAAAATATCATTTTTGAGAGACATCAAAGCTCAACAAAGAAGTTTGCGAGACTATTCAAAGACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCGTGGAATGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACAGAATGAAATTGATCCATCTGATGCCATTAATTTGGTTAATTCAGGTTGTCGTATACTAGTAGAAGGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTCTGAGGAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCCGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCGCCAGAGGACTTTGAATCTAAATTACAGGAAGCAATGAAGCAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGCTATCAAAAAGAAAGCCCTGAGGCTCTGGTACATGGAGCAGTCATCTCTGCCTTTCTAACCATTGCTCAAGCCATGACTGATCAAGGCTCTATATAG 1920 0.4323 MLLPASGVGMNSAMDDMNLIQQTQRHHLVVRGMGIGEEIDLEIGAGEDDPSFGNATLIGAPMRESSVEEHGESKEMGMVSQLPNDAQDMSKTQQVKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYINIMERLLEPERMIVFRVSWVDDRGETCVNRGFRVQFNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFACASQNEIDPSDAINLVNSGCRILVEGSNMPCTPEAVQILRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00310 639 Gene3D Leucine Dehydrogenase, chain A, domain 1 242 377 - -
Pumo7g00310 639 FunFam NADP-specific glutamate dehydrogenase 569 639 - -
Pumo7g00310 639 Gene3D Glutamate Dehydrogenase, chain A, domain 3 198 241 - -
Pumo7g00310 639 Gene3D - 396 561 - -
Pumo7g00310 639 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 390 637 IPR036291 -
Pumo7g00310 639 FunFam Glutamate dehydrogenase 242 377 - -
Pumo7g00310 639 Gene3D Glutamate Dehydrogenase, chain A, domain 3 568 639 - -
Pumo7g00310 639 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 390 637 IPR006096 GO:0006520|GO:0016491
Pumo7g00310 639 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 198 383 IPR046346 -
Pumo7g00310 639 SMART ELFV_dehydrog_3 391 637 IPR006096 GO:0006520|GO:0016491
Pumo7g00310 639 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 244 371 IPR006097 GO:0006520|GO:0016491
Pumo7g00310 639 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 144 638 - -
Pumo7g00310 639 FunFam NADP-specific glutamate dehydrogenase 198 241 - -
Pumo7g00310 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 301 315 IPR006095 GO:0006520|GO:0016491
Pumo7g00310 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 559 570 IPR006095 GO:0006520|GO:0016491
Pumo7g00310 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 422 442 IPR006095 GO:0006520|GO:0016491
Pumo7g00310 639 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 380 402 IPR006095 GO:0006520|GO:0016491
Pumo7g00310 639 FunFam Glutamate dehydrogenase 396 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00310 Pumo-Chr7 4032672 4041333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00310 219 509 EF-hand Containing Proteins AT5G07440 30.508 2.27e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00310 K00262 - gmx:100788009 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00310 7 4032672 4041333 Pumo7g00310 7 4032672 4041333 ECH