Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00299 ATGTGTTCCTTCAAATGGTTCTGTTTGTTCATCATTTTCCATGTCTTGGCAGCAAAACCCATGTTCTCATTATCAGATTCTTCAAACCAACTCTCCAAGAAATTTCTAGATGCAGCCAAGAAGCCTGAAGTATTTGATTGGATGGTCAAAATCAGAAGGAAGATTCATGAGAATCCAGAATTGCGTTATGAGGAAGTTGAGACCAGTCAACTCATTAGAAAGGAATTGGAAAAACTGGGTATCCCATATAATCATTCAGTTGCTGTCACTGGTGTTATTGGCTTCATAGGGACAGGAAGCGCACCTTTTGTTGCAATAAGAGCTGATATGGATGCACTTAGAATCCAGGAAATGGTGGAGTGGGAACACAAGAGTAAGGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTCGCAATGCTTCTTGGGGCAGCAAGGATTCTCAAACAGCATGAAAAAGAGATAAAGGGAACTGTTGTTCTTGTTTTCCAACCAGCGGAGGAAGGAGGTGCAGGGGCTAAGAAAATTTTAGAATCCGGATTCTTAGAAAATGTTATTGCCATCTTTGGATTACACGTGGCGCCTGACATTCCAGTAGGTCAAGTGTCCGGTAAGTCTGGTCCATTAATGTCAGGAAATTGTGGATTTCGAGCAACAATAACTGGAAAGGGAGGTCATGCAGCTATGCCCCACCAATCTATAGACCCTATTTTGGCAGCTTCTAATGTCATTATTAGCTTACAATACCTTACTTCTCGCGAGGCTGATCCTTTCGACCCCCAGGTTGTGACAGTTGCAAAGTTCCAAGGAGGTAATGCAACGAATGTTATTCCAGAATCTGTCGAAATTGGTGGCACAATACGAGCTTTTTCTTTAAAAACATTGGAGCGACTTAAAGAGCGCATTAAGCAGGTTATCACTGATCAAGCTACCGTGCTGAGGAGTAATGCAAAAGTCACCTTCTTTAATAAGAGTTCATATCCTCCAGTTGTGAATGATGATAAGTTGCACAATTTTTTTGTTGATGTAGCTGGGAATTTGCTTGGCAACGATAGTGTTATTATTAACAAGCAACCATTCATGGCCTCTGAAGACTTTGCGTTCTATCAAGAGAAAATGCGTAGCTACTTCATCGGGCTTGGAACGAGGAATGCTTCTGATGATGAAGAGCCCCAGCGATTACACTCGTCCCATCTCAAAATCAATGAAAATGGATTTCCTTATGGGGCTGCACTTCATACATCATTGGCTATTAGTTATCTTGAAAAAATATATCAGCAGCAGGACGTAGCCAAGGTAGTTGTGGAAAAATATGATGAATTATAA 1332 0.4144 MCSFKWFCLFIIFHVLAAKPMFSLSDSSNQLSKKFLDAAKKPEVFDWMVKIRRKIHENPELRYEEVETSQLIRKELEKLGIPYNHSVAVTGVIGFIGTGSAPFVAIRADMDALRIQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAARILKQHEKEIKGTVVLVFQPAEEGGAGAKKILESGFLENVIAIFGLHVAPDIPVGQVSGKSGPLMSGNCGFRATITGKGGHAAMPHQSIDPILAASNVIISLQYLTSREADPFDPQVVTVAKFQGGNATNVIPESVEIGGTIRAFSLKTLERLKERIKQVITDQATVLRSNAKVTFFNKSSYPPVVNDDKLHNFFVDVAGNLLGNDSVIINKQPFMASEDFAFYQEKMRSYFIGLGTRNASDDEEPQRLHSSHLKINENGFPYGAALHTSLAISYLEKIYQQQDVAKVVVEKYDEL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00299 443 Pfam Peptidase dimerisation domain 214 312 IPR011650 -
Pumo7g00299 443 PIRSF Amidohydrol_AmhX 33 426 IPR017439 GO:0016787
Pumo7g00299 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 22 429 IPR017439 GO:0016787
Pumo7g00299 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 214 321 IPR036264 -
Pumo7g00299 443 NCBIfam amidohydrolase 48 409 IPR017439 GO:0016787
Pumo7g00299 443 SUPERFAMILY Zn-dependent exopeptidases 43 424 - -
Pumo7g00299 443 Gene3D Zn peptidases 48 406 - -
Pumo7g00299 443 Gene3D - 213 329 - -
Pumo7g00299 443 FunFam N-acetyldiaminopimelate deacetylase 213 330 - -
Pumo7g00299 443 Pfam Peptidase family M20/M25/M40 105 418 IPR002933 GO:0016787
Pumo7g00299 443 CDD M20_IAA_Hyd 48 423 IPR044757 GO:0009850|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00299 Pumo-Chr7 3871912 3877423 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00299 K21604 - gmx:121172631 629.787