Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00252 ATGGTGAGTGAGCAGAGAATAGCAGAGGAGGCAAAGGTGGCGGCGTTGGAGTGCAGTGGCACAATGAGTGGACCCCTCGTCGGAGCTTCCTCCTCCGCCGGGACTCGCCGGCGCCGGAGGGCGGAGGCTATGCAATTGGTTCTGAGAGCGTTGTGCGTGGCTTCCTCTGTTGTTGCGATCTCACTCATGGTCACTGCCAAGGAATCTAGCTCTGTCTCTATCTATGGCTTTCTCTTACCTCTTCACTCCAAGTGGTCTTTCTCTGAGTCATACGAATATCTTGTTGGGGTTTCTGCTGCTGTCGCAGCTCATTCCTTGCTTCAACTCCTCATTGGCACATCGAGATTTCTTAGGATGTCTTCTGTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGCATTTGCTTATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACACACAGCTCTGCCAGATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGCCATCTCAATAGCCTTCACTTTCACCAGCTGTTTTTTGCTGGCTACATCTGCTGTTCAGGATGTAATATGGCTATCTCAACACTGA 627 0.4976 MVSEQRIAEEAKVAALECSGTMSGPLVGASSSAGTRRRRRAEAMQLVLRALCVASSVVAISLMVTAKESSSVSIYGFLLPLHSKWSFSESYEYLVGVSAAVAAHSLLQLLIGTSRFLRMSSVIPSRNHAWLIFAGDQAFAYALMSAGSAASGVTNLNRTGIRHTALPDFCKPLHKFCDHVAISIAFTFTSCFLLATSAVQDVIWLSQH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00252 208 Pfam Casparian strip membrane protein domain 39 192 IPR006702 -
Pumo7g00252 208 NCBIfam plant integral membrane protein TIGR01569 46 196 IPR006459 -
Pumo7g00252 208 PANTHER CASP-LIKE PROTEIN 4A4 31 203 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00252 39 208 Miscellaneous Gene Families AT3G16300 52.941 6.24e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00252 - - gmx:100783028 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00252 7 2812894 2815378 Pumo7g00252 7 2812894 2815378 ECH