Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00240 ATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCCCACACCCTCCTCCCCAGATGGAAATCTCTTTCCCTCTCTCATCAGCAGTCAACGATTCCAATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCAAGATTGGACGTTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAAGTGTTCTCATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCCGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGATAAGCCAACCCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGATGAGCGTGCAGTAGAACCAAGAGATAAAGTCAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTATTGCCACTGTTGGTGGTCAGTATATATGGGCTCGTTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCTCGACGTTTATGGATCTTGATACAACGGATAGAAGGAATATATAGAGCTGCTTCATTTGGAAACCTGTTGATATTTCTTTGCACGGGAAGATATCGAAATCTTATCGAAAGAGCCTTACGAGCTAGGCTTGTATATGGAAGGCCAAATATGAATCGTGCTGTTAGCTTTGAATATATGAACCGGCAATTAGTTTGGAATGAATTTTCGGAAATGTTATTGTTGCTTCTCCCCCTTCTTAATTCATCATCTGTGAAAAATCTCCTTCGACCTTTCTCTAAAGATAAATCATCGGGTTCAGCCGAGGATGGCACAGCATGTCCCATTTGCCAGGCTACTCCAACAATTCCTTATGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCAGTTGTTGCTATGCAACGGCATGGTGGTGTCCACACAGAATGA 993 0.4381 MTLPSHDAWIHTSHTLLPRWKSLSLSHQQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKVRTGLEGPGLTVAQKLWYCIATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGRPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSGSAEDGTACPICQATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHGGVHTE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00240 330 ProSitePatterns Zinc finger RING-type signature. 290 299 IPR017907 -
Pumo7g00240 330 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
Pumo7g00240 330 PANTHER PEROXISOME BIOGENESIS FACTOR 2 3 328 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Pumo7g00240 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 326 IPR013083 -
Pumo7g00240 330 Pfam Zinc finger, C3HC4 type (RING finger) 274 314 IPR018957 GO:0046872
Pumo7g00240 330 SMART ring_2 274 314 IPR001841 -
Pumo7g00240 330 Pfam Pex2 / Pex12 amino terminal region 48 252 IPR006845 -
Pumo7g00240 330 CDD RING-HC_PEX2 272 318 IPR045859 -
Pumo7g00240 330 SUPERFAMILY RING/U-box 268 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00240 K06664 - gmx:100805856 645.966