Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00232 ATGAGTCGCTCATTGAAAGCTTTCAACAAACACCTCACTCTCCTCCCTCTCTCTCTCCATCAACGCACTGCTTCCTCTTCCCATGCCTTCATAGCTTCCTCTTCCTTCCCTCTTTTCCCGCATCTCGTTGCCTACCCAAGGTTCTCTTTCTCTCAGTTTCGTCCACTCTCTTCATCTGCACCAGATACATTAATGGAGGTGGTCAAAGCAATTGCTAAACACGAACCTGCAGCTCCTGAAAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTCATCTCATCGGCACAGAAGATATCTAATCTCTTATGTGGCAGTAATGCACAAACAGGAAATCTCGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCCGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGGATGTATCTGCAATACTGAGTACTGAAGATCATAGTGAAATAATGCAAAGCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCATCTGTTCTCAACAAGTCTTCAGAGAAAAGCAGAGATGAACATTCACAGAATGGGGGAATTCATGTAGACAGAATTTCCTTGGATAATATTGGAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCGTGGGAGTACACATCTGCTGACCAGTTTCTGCATTGTCTACCACTACATCATGTTCACGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGTTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGAAGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGCTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGCATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCGCTTCCACTACCTGTTATGCAAGAATGGGAAGTCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTATCGAATCCATTGAAAGGTGAGCGCAAGCCAGGAACCGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATTATTGCAGATGAAGAGAGTGAGAATGAAAATACTAGAACGGGTGAGCTTTGCAGTTAA 1341 0.4385 MSRSLKAFNKHLTLLPLSLHQRTASSSHAFIASSSFPLFPHLVAYPRFSFSQFRPLSSSAPDTLMEVVKAIAKHEPAAPESVAIRADQKSYSYKQLISSAQKISNLLCGSNAQTGNLGGARIGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVINNSDVSAILSTEDHSEIMQSVANKSSSQFFHLPSVLNKSSEKSRDEHSQNGGIHVDRISLDNIGRSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWEYTSADQFLHCLPLHHVHGFFNGLMAPLYAGSSVEFLPKFSVRGVWQRWRESYPTDGSKAEDAITVFTGVPTIYARLIQGYHAMDPELQAASASAAKNLRLMMCGSSALPLPVMQEWEVITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESENENTRTGELCS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00232 446 SUPERFAMILY Acetyl-CoA synthetase-like 58 445 - -
Pumo7g00232 446 PANTHER ACYL-COA SYNTHETASE 64 445 - -
Pumo7g00232 446 Gene3D - 67 446 IPR042099 -
Pumo7g00232 446 PRINTS AMP-binding signature 230 241 IPR020459 -
Pumo7g00232 446 PRINTS AMP-binding signature 242 250 IPR020459 -
Pumo7g00232 446 Pfam AMP-binding enzyme 78 445 IPR000873 -
Pumo7g00232 446 Coils Coil 445 446 - -
Pumo7g00232 446 ProSitePatterns Putative AMP-binding domain signature. 235 246 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00232 Pumo-Chr7 2620347 2626230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00232 145 445 Acyl Lipid Metabolism Gene Families AT5G27600 26.816 6.27e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00232 K18660 - gmx:100813324 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00232 7 2620347 2626230 Pumo7g00232 7 2620347 2626230 ECH