Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00230 ATGCCAAACCTTGTTGGCGGCGCTCTTTGCGGCATGTACTTCGTGGCTTCTCTTTCTTCATTCTTGTATGGATACCATATTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTGTAGATCTTGGATTTAGTGGGAATACAATGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTGTTGGATCTCTGTTCAGTGGATGGATTGCAGATGGTGTTGGGCGTAGAAGAAGTTTCCAGTTGTGTTCTTTACCTATGATAATTGGGGCTGGAATGAGTGCAACAGCAAAAACTCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTACGAGGTGCTTTTGGGGCCTTAACCCAAATTGCAACATGTCTTGGACTCATGGGTTCTCTCTTTATTGGAATCCCAGCAAAGGATATAGTTGGTTGGTGGCGGAATTGTTTCTGGGTATCTGTCATTCCTGCTACGATACTTGCCATTTTTATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAGAGGAAGAACCATTGAAGCTGAAGCTGAATTTGAGAAGCTCTTGGGAGGAGTGCATGTGAAACCTGCAATGACTGAACTGTCAAAGTCTGACAGAGGTGATGGATCTGATACAGTAAAACTTTCAGAATTAATCTATGGCCGCCATTTCAGAGTGATGTTCATTGGATCTACACTTTTTGCGTTGCAGCAGCTATCTGGCATAAATGCTGTTTTCTATTTCTCTTCAACTGTCTTTGAAAGTTTTGGTGTACCATCTGATATTGCAAACACATGTGTAGGAGTTTGCAATTTATTGGGGTCAGTTGTTGCAATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTGGGTAGCTTTCTTGGCATGGCGTTATCAATGGGTCTACAAGTCATTGCTGCAAGTTCTTTTGCATCAGGATTTGGAGCAATGTATCTATCTGTTGGTGGCATGTTACTGTTTGTGCTGTCATTTGCTTTCGGTGCCGGTCCAGTTCCTTGTCTTATCATGTCTGAAATACTACCCGGCAATATCAGAGCAAAGGCAATGGCAATTTGCCTGGCTGTGCATTGGGTGATAAACTTCTTCGTGGGTCTATTTTTTTTGCGCTTGCTGGAGCTAATTGGGGCGCAACTCCTGTATAGTATTTTTGGTTCATTTTGTTTGATAGCAGTGATTTTTGTGAAGAAATATATTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAAGTTGCACTTCTTGCACAAGAAGCAAACTGA 1356 0.4277 MPNLVGGALCGMYFVASLSSFLYGYHIGVVNETLESISVDLGFSGNTMAEGLVVSICLGGAFVGSLFSGWIADGVGRRRSFQLCSLPMIIGAGMSATAKTLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGAFGALTQIATCLGLMGSLFIGIPAKDIVGWWRNCFWVSVIPATILAIFMEICAESPHWLFKRGRTIEAEAEFEKLLGGVHVKPAMTELSKSDRGDGSDTVKLSELIYGRHFRVMFIGSTLFALQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLLGSVVAMILMDKLGRKVLLLGSFLGMALSMGLQVIAASSFASGFGAMYLSVGGMLLFVLSFAFGAGPVPCLIMSEILPGNIRAKAMAICLAVHWVINFFVGLFFLRLLELIGAQLLYSIFGSFCLIAVIFVKKYILETKGKSLQEIEVALLAQEAN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00230 451 PRINTS Sugar transporter signature 105 124 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 PRINTS Sugar transporter signature 260 270 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 PRINTS Sugar transporter signature 369 381 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 PRINTS Sugar transporter signature 346 367 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 PRINTS Sugar transporter signature 20 30 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 ProSitePatterns Sugar transport proteins signature 1. 301 317 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 PANTHER SOLUTE CARRIER FAMILY 2 8 445 IPR045263 -
Pumo7g00230 451 ProSiteProfiles Major facilitator superfamily (MFS) profile. 12 434 IPR020846 GO:0022857
Pumo7g00230 451 ProSitePatterns Sugar transport proteins signature 1. 68 85 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 Gene3D MFS general substrate transporter like domains 5 446 IPR036259 -
Pumo7g00230 451 SUPERFAMILY MFS general substrate transporter 13 442 IPR036259 -
Pumo7g00230 451 CDD MFS_GLUT_like 15 432 - -
Pumo7g00230 451 NCBIfam sugar porter family MFS transporter 12 441 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo7g00230 451 Pfam Sugar (and other) transporter 13 443 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00230 Pumo-Chr7 2592221 2605243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00230 15 390 Organic Solute Cotransporters AT1G67300 70.370 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00230 - - gmx:100811182 827.394