Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00224 ATGGGATCAATTGGGGTACTCCTGGTGGCTCAGGTGATACCCTACCTGGAGCAAGAGCTGGACAAGCGCTACAAGCTGTTTCGCGCCTCGAACGCGGGTGCGGACGCGGCGGTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCGAGCTTCAGCGTGGGAGTGGACAGGATAGACCTGGACAAGTGCAAGGAGAAGGGGATTCGCGTCACCAACACGCCCGACGTCTTGACCGACGAGGTCGCCGACCTCGCCATCGGCTTGATGCTCGCGCTCCTCCGGAGGATCTGCGAGTGCGATCGCTATGTCAGGGGCGGCAAGTGGAAGCAAGGGGACTACAAATTGACCACTAAGTTCTCTGGGAAAACTGTTGGCATTATTGGGCTAGGGAGGATTGGCCAAGCAATTGCCAAGAGAGCTGAAGGATTCAACTGTCCCATATGCTACTACTCTAGAACTGAAAAACGAGACTCAAAATACAAGTACTATCCAAGTGTTGTAGAACTAGCATCTAACTGCCAGATACTGGTAGTTGCTTGCCCACTAACGGAGGAAACTCATCACATCATCAACAGGGAGGTGATCAATGCACTGGGTCCCAAGGGTTATCTTATTAACATTGGACGAGGTAAGCATGTTGATGAGCCAGAGTTAGTGTCAGCACTGCTAGAAGGTCGTTTGGGTGGGGCTGGGATAGATGTGTTTGAAAATGAGCCTACTGTTCCCGAAGAACTATTTGGGCTTGAAAATGTTGTCTTGTTGCCTCATGTTGGAAGTGGCACAGTAGAAACTCGAACCGCCATGGCTGACCTTGTCCTTGGAAACCTGGAAGCTCATTTCCTTGGAAAACCACTGTTAACTCCCTTGGTTTAA 873 0.5155 MGSIGVLLVAQVIPYLEQELDKRYKLFRASNAGADAAVIEALPKLEIVSSFSVGVDRIDLDKCKEKGIRVTNTPDVLTDEVADLAIGLMLALLRRICECDRYVRGGKWKQGDYKLTTKFSGKTVGIIGLGRIGQAIAKRAEGFNCPICYYSRTEKRDSKYKYYPSVVELASNCQILVVACPLTEETHHIINREVINALGPKGYLINIGRGKHVDEPELVSALLEGRLGGAGIDVFENEPTVPEELFGLENVVLLPHVGSGTVETRTAMADLVLGNLEAHFLGKPLLTPLV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00224 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 259 IPR036291 -
Pumo7g00224 290 FunFam Putative 2-hydroxyacid dehydrogenase 78 261 - -
Pumo7g00224 290 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 287 IPR006139 GO:0016616|GO:0051287
Pumo7g00224 290 Gene3D - 22 284 - -
Pumo7g00224 290 Gene3D - 78 261 - -
Pumo7g00224 290 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 23 109 - -
Pumo7g00224 290 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 124 151 IPR029752 -
Pumo7g00224 290 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 86 258 IPR006140 GO:0051287
Pumo7g00224 290 CDD HPPR 4 280 - -
Pumo7g00224 290 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 30 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00224 Pumo-Chr7 2543551 2545327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00224 - K18606 gmx:100779623 542.347