Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00217 ATGGTGGCGACAGGTGGGGTTGGTTCGGATGATGAACCTGATTGGATGAGGGACTTCCTCATCAACAAAGAGGAGAAGAAGAAGAAGGAAGAGAAGTGTGGCTCTGTGTGCGGAAAACCTCATAGTAAGAAGAAGAGTAAGGAAATTCCTAAGGATTTTAAGGTTATGGGCGTTGGAGAGGAAAAGGGGTGTGAGAGTTTGCAAAAGAAAATTGATGCAGTAGAAATCAGTGATAAGGAGTTTTTACTAGAGGAATATGAGAGTGAAGATGAGAAAGGTTTAGGGAGTGTGGTGTCCAAGAGGAAGGCTGTTAAAACTTCCTTTAGTTCCTCTAGTGAAGATGAGTCTGGCGAGGAAGAAGAGGAGGAGAAGAAGTTGAGGGTGTATTTCTGTAGTAGAACTCATTCACAGCTTTCACAGTTCATAAAGGAGTTGCGGAGGACAGTCTTTGCTACTGAGATGAATGTTGTGAGTTTAGGCTCCAGGAAAAATCTTTGCATTAATGAAGAAGTAGTTGCACTTGGAAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAACCTACAAAAGTTAAGAACTTAAAAGTAGGTGCAGGGGTACGCAGAACAAAGGCCTCCTCTGGCTGCCCAATGCTTAGAAAACATAGAGTTCAACAGGAATTTAGGAATGAGGTATCTCAACAAGGGCCCTTGGATATTGAAGATCTTGCTAATCTTGGAAGAACTATGGGAACATGCCCATACTATGGGTCTAGAAGCATGGTTCGGAGAGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTGTCTAAATCATCTCGTGAAGCACTTGGTCTGAATTTGAAATCCAATATTATTATAATAGACGAGGCTCATAATTTAGCTGATTCACTGATCAACATGTATGACTCCAAAATTACTTTATCACAGCTGGAGACTGTGCACAGCCATGTGGAACGGTACTTTATGAGATTCCGAAATCTTTTGGGACCTGCTAATCGGAGATATATTCAAACTCTGATGGTCCTCATGCAAGCTTTTCTCCGAGGACTACTTGATGATAAAGATGGAAATCTTATAGATTCTTGCCGTGATATAGATCAAGCTTCTGAAGAAACCAGAGCCTCTGATTTTACTATGGCCATCAATGATTTTTTATTTGAACTAAATATAGACAACATCAACTTGGTCAAACTGTTAAAGTATATAAACGAAAGTAATATCATGCACAAGGTTAGTGGTTATGGTGAAAAACTGGCTACCTTGGAGAAAATGCCAGCACTCCATAAAATCAGGGAACATGCTGAGGAGGGAAGCTGCGTATCTGCTTTCCGAGCCTTAGCTGACATATTGCTATCACTGACAAACAATGATGGTGATGGAAGGATAATAATTTCCAGGTCTAGGTCAACGAGCCTCAGGAAGCAAGGAGGATATATGAAGTATGTTATGCTTAGTGGAGAGAAGATTTTTTCCGAGATTGTAGATGAAGCACATGCCGTTGTATTAGTAGGGGGAACACTTCAACCTATAGAAGAGACAAGGGAGCGACTCTTTCCGTGGTTACCACCAAATCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCTGACAGCATTATGCCAATTGCAGTTACACGTGGACCTACTGGACGCTCCTTTGATTTTAGCTTCAGCTCCAGGAGCTCGCCAGACATGATGCGAGAACTTGGTCTTTTGCTATGTAATTTGGTGACTGTGGTTCCCGAAGGAATTGTAGTTTTCTTCCCTTCTTTTGATTATGAAAATAGAGTCTATGAACATTGGGAGTCATCTGGCATCCTTGAAAGGATTACAAAGAGGAAGCGTGTCTTTAGGGAGCCTAGAAATAACATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTGATACATTATCGGTTATGAATTCAGAAGCAAACCAAGCATCTCATAGTGGTGCAATACTCCTTGCTGTTGTTGGTGCAAAGTTATCTGAAGGGATCAACTTAAGTGATGGGATGGGCCGATGTATAGTCATGGTTGGACTGCCATATGCTAGCCCGTCTGACATTGAGTTGTTGGAGAGGATAAAGCACATTGAAGGTATTCGAAATTTAAATCTTCTTGAGAATCCTAGCGTTTCTGCCAGTTATGATCTATACAGTGGAAATGTACAAGGTGGTTTTGACATTTTAAGAAGTTGCAGTCACAGAGGAAAAGAGTATTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACAAGGTATGCATCTGATTCCTCGAAACGGAGCTTTTCCCACCCAGTTACCAAGCTCCCCCAGTGGATAAAAGATCGTCTTGTATCTCCTACCATTAACTATGGGGAGGTGCATAGGTTGTTGCATCAGTTTTTCAAACTCAAAAAAACATGCTGCCATTAG 2508 0.4111 MVATGGVGSDDEPDWMRDFLINKEEKKKKEEKCGSVCGKPHSKKKSKEIPKDFKVMGVGEEKGCESLQKKIDAVEISDKEFLLEEYESEDEKGLGSVVSKRKAVKTSFSSSSEDESGEEEEEEKKLRVYFCSRTHSQLSQFIKELRRTVFATEMNVVSLGSRKNLCINEEVVALGNSTRINERCLELQKKKKNEPTKVKNLKVGAGVRRTKASSGCPMLRKHRVQQEFRNEVSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRRADLVVLPYQSLLSKSSREALGLNLKSNIIIIDEAHNLADSLINMYDSKITLSQLETVHSHVERYFMRFRNLLGPANRRYIQTLMVLMQAFLRGLLDDKDGNLIDSCRDIDQASEETRASDFTMAINDFLFELNIDNINLVKLLKYINESNIMHKVSGYGEKLATLEKMPALHKIREHAEEGSCVSAFRALADILLSLTNNDGDGRIIISRSRSTSLRKQGGYMKYVMLSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSIMPIAVTRGPTGRSFDFSFSSRSSPDMMRELGLLLCNLVTVVPEGIVVFFPSFDYENRVYEHWESSGILERITKRKRVFREPRNNMDVESVLKEYKDTIDTLSVMNSEANQASHSGAILLAVVGAKLSEGINLSDGMGRCIVMVGLPYASPSDIELLERIKHIEGIRNLNLLENPSVSASYDLYSGNVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVTKLPQWIKDRLVSPTINYGEVHRLLHQFFKLKKTCCH 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00217 835 SMART Cxpdneu3 600 787 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pumo7g00217 835 Gene3D - 94 353 IPR027417 -
Pumo7g00217 835 Gene3D - 560 801 IPR027417 -
Pumo7g00217 835 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 106 828 IPR045028 -
Pumo7g00217 835 Pfam DEAD_2 130 318 IPR010614 GO:0003677|GO:0003678|GO:0005524
Pumo7g00217 835 Coils Coil 639 659 - -
Pumo7g00217 835 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 45 347 IPR014013 GO:0005524
Pumo7g00217 835 NCBIfam DNA repair helicase (rad3) 79 813 IPR013020 GO:0003678
Pumo7g00217 835 Pfam Helicase C-terminal domain 582 797 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pumo7g00217 835 SMART deadxpd 12 341 IPR006554 GO:0003678|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00217 Pumo-Chr7 2477511 2482555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00217 K11273 - gmx:106794132 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00217 7 2477511 2482555 Pumo7g00217 7 2477511 2482555 ECH