Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00211 ATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGCTTGTCCTACGTGAAGTTTCTGAAGACTCGGCTAGAGATTATAAAGAAGAAGAAGAAAGCAGTGCAGAAGTTTATGAAGAGTGACATTGCCGAGCTTCTTAGGAGTGGCCTTGACTATGATGCATATATAAGGCAGGCTGAAGTGCTTCTGTTCGAGCAAAGAATGTTATCCTGCTATGAACTCATTGAGAAGTTTGTTGGATGCATATCAGATCATGTTGAAGACCTAACTAAGCAGAAGGATTGCCCTGATGAGTGCAAGGAAGCTGTGCCATCATTGATGTATGCTGCTGCAAGTTTCGGTGATCTGCCAGAATTGCGTCACCTCAGAACATTATTTACTGAGAAATTTGGGAATTCTCTTGAACCTTATATTAACAAAGAGTTTGTTGAGAAGCTGAGGAAAGATCCGCCAACGAGAGAAATGAAGATTGGACTATTATATGATATAGCACAAGATTTCTCTGTAGAGTGGGATGACAAGGCTTTGAGGCGAAGACTTTATACACAGTCGTCATTATGTGAAGAGAGGCCTAATCCTGGGGGAGACTTCAATACATCCAAAGGAAAGGAAAGAGACACCCTACCTTTTGGAAGGAAAGATTTCAATGATGACTCATTGATACACCAAAATAGTAGTGATGATGAAACAAGTACAGAGCTGTCATCCCATGATGGCAGAAAAAGTAGTAGTTCAAGTTCATTGGGAAGCTTTTCTGAGGATGAAGTAGAAACTAAGAGGTCAATTTCATCCTATTGGCTCATTCCACCCCCATACCTCAAACAGAAAACTAACACAGGTGAAAGCAATTCAAAGAAAGCAACACATTCTGAGGCTGCAACAATAGATTCAAGTGGAATGAAATCCGGCAAAGGAAAACGTTATCCTTCTCAACAACCAGAACATGATACTGACCAAAACAGAAGGCGTGGTACAACATCACATGTCAGAGGAAAATCTCTTTCTTCTGAACCCACAACTGCAGTGGAAACATCAAAGGGGCATACACGAACAATTTCCTTAGAATCAGGAATGCGGGGTGGTGCATGGCGTGTGCATCCAAATCTACCCGATTATGATGATTTGAGAGCTCATCTTTTAGCTCTCAGACAGAGATAA 1161 0.4134 MFRWLLKPRFYSKCLSYVKFLKTRLEIIKKKKKAVQKFMKSDIAELLRSGLDYDAYIRQAEVLLFEQRMLSCYELIEKFVGCISDHVEDLTKQKDCPDECKEAVPSLMYAAASFGDLPELRHLRTLFTEKFGNSLEPYINKEFVEKLRKDPPTREMKIGLLYDIAQDFSVEWDDKALRRRLYTQSSLCEERPNPGGDFNTSKGKERDTLPFGRKDFNDDSLIHQNSSDDETSTELSSHDGRKSSSSSSLGSFSEDEVETKRSISSYWLIPPPYLKQKTNTGESNSKKATHSEAATIDSSGMKSGKGKRYPSQQPEHDTDQNRRRGTTSHVRGKSLSSEPTTAVETSKGHTRTISLESGMRGGAWRVHPNLPDYDDLRAHLLALRQR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00211 386 MobiDBLite consensus disorder prediction 200 225 - -
Pumo7g00211 386 MobiDBLite consensus disorder prediction 238 253 - -
Pumo7g00211 386 PANTHER IST1 FAMILY MEMBER 13 384 IPR005061 GO:0015031
Pumo7g00211 386 MobiDBLite consensus disorder prediction 188 255 - -
Pumo7g00211 386 MobiDBLite consensus disorder prediction 330 353 - -
Pumo7g00211 386 MobiDBLite consensus disorder prediction 272 371 - -
Pumo7g00211 386 Pfam Regulator of Vps4 activity in the MVB pathway 18 170 IPR005061 GO:0015031
Pumo7g00211 386 MobiDBLite consensus disorder prediction 309 326 - -
Pumo7g00211 386 Gene3D - 4 180 IPR042277 -
Pumo7g00211 386 MobiDBLite consensus disorder prediction 276 298 - -
Pumo7g00211 386 FunFam Vacuolar protein sorting-associated protein IST1 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00211 Pumo-Chr7 2385521 2388492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00211 - - gmx:102665874 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00211 7 2385521 2388492 Pumo7g00211 7 2385521 2388492 ECH