Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00170 ATGGCGTTGTTCTCTGCTACCGCAACCGTTCTTCCTCGAAACCTCGCCTTCGCTTCCTCCACCAAACTCTCCCTCTCTTCCTCTCTTCTACGTTCTTCTTCTTCTCCGCGCTTCCTTTCATTCCCCACTCCTCAATCAAACCCTCGCAATCGCGTCACAATCTCCCTCCAACCCCCACGCGCTCAATCCGGCGCGTCTGCTTCCCCCTCCGCTTCCTTCCACGGCCTCTGCTACGTCGTCGGCGACAACATCGACACCGACCAGATCATCCCCGCCGAGTACCTCACCCTCGTCCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTCGTCGGCCTCCCCGCCACCTACGCCACGCGCTTCGTCGAGTCCGGCGAGACTAAGACCAAGTACGCCATCGTCATCGCCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCCCCCGTCGCGCTGGGAGCCTCTGGCGCCGCCGCAGTGGTCGCGGAGTCGTACGCAAGGATCTTCTTCCGGAACTCGGTGGCCACCGGCGAGGTGTACCCGCTGGAGTCGGAGGGACGCCTCTGCGAGGAGTGCACCACCGGCGATGTCGTGACGATTGAGCTTGGAGAGAGCCGTTTGATCAATCACACCACCGGAAAGGAGTACCGGTTGAAACCGATCGGCGACGCGGGTCCTGTGATTGAGGCCGGTGGCATCTTTGCCTATGCGAGGAAAACCGGCATGATTCCCTCTCGTTGA 753 0.6228 MALFSATATVLPRNLAFASSTKLSLSSSLLRSSSSPRFLSFPTPQSNPRNRVTISLQPPRAQSGASASPSASFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPATYATRFVESGETKTKYAIVIAGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECTTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPSR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00170 250 FunFam Isopropylmalate/citramalate isomerase small subunit 70 246 - -
Pumo7g00170 250 Pfam Aconitase C-terminal domain 133 181 IPR000573 -
Pumo7g00170 250 SUPERFAMILY LeuD/IlvD-like 74 247 - -
Pumo7g00170 250 NCBIfam 3-isopropylmalate dehydratase, small subunit 77 243 IPR011827 GO:0016836
Pumo7g00170 250 CDD IPMI_Swivel 79 206 IPR033940 -
Pumo7g00170 250 MobiDBLite consensus disorder prediction 33 52 - -
Pumo7g00170 250 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 69 248 - -
Pumo7g00170 250 Gene3D Aconitase, domain 4 71 246 IPR015928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00170 Pumo-Chr7 1913350 1914885 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00170 K01704 - gmx:100782688 398.667