Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00162 ATGCGAAGAGATTTCTGTGATGGTGTGGGCATTGCTCGTCTGTTAAATGCAACCCTCGTCCTGCCAAAGTTTGAAGTTGCTTCATATTGGAATGAAACAAGTGGTTTTGCAGATGTATATGATGTAGACTACTTCATACAGCATATGAATGGCTTTGTCAAAATTGTCAAAGAGTTACCACCAGAGATTGCATCAAAAGAACCCGTTCGAGTGGACTGTAGCAAACGGAAAGGGCAATTTGATTATGTTGAGAGTGTTCTTCCATCTTTGTTAGAGCACAAGTACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTCTGTCAAGCTTGTTACAAGGCATTGCGTCTCACCAGATCCTTGGAAATGAAAGCCTCTCAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTTGAGCCCGACATGGTTGCATACAGCCAGTGCGAGTACCCTGGCCTTTCTCCTGCTTCCATGAAAGCCATAGAAGCAGCACAAGTGGACAGAAAACCATGGACTGGAGAGTTAGCCCGTGTTTGGAGACTACGAGGGAAATGTCCGCTTACACCTAATGAGACAGCTTTAATACTTCAATCTCTTTCCATCCCACCATCCACAAATATATACCTGGCAGCTGGAGATGGTTTGATGGAAATTGAAGGGTTGACTGATACCTACGCCAACATAGTTACTAAGTCAAGTCTTCTCAGTAGGGAAGACTTCACAACCATGCATGGCAATACAAAAGCTGCTTTGGATTATTATGTATCTATTAACAGTGATTCATATATAGCCACATATTTTGGCAACATGGATAAGATGGTTGCAGCAATGAGAGCTTTCAATGGTTTGTATAAGACTCTATTTTTGAGCAGAAGAGGTTTTGCACAATTAACCTCACAGGGTCTTAGGGGAAAGGAGTTGATGCAAGCACTGTGGAAGGTTCACAGAGATGATTTTGCCATGGGAAGAGGCTCTGCTCTGTCTGAGTGTTTTTGCGAATTCAAGTTGTGA 1056 0.4261 MRRDFCDGVGIARLLNATLVLPKFEVASYWNETSGFADVYDVDYFIQHMNGFVKIVKELPPEIASKEPVRVDCSKRKGQFDYVESVLPSLLEHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLTRSLEMKASQLLDAIPKPFLSLHLRFEPDMVAYSQCEYPGLSPASMKAIEAAQVDRKPWTGELARVWRLRGKCPLTPNETALILQSLSIPPSTNIYLAAGDGLMEIEGLTDTYANIVTKSSLLSREDFTTMHGNTKAALDYYVSINSDSYIATYFGNMDKMVAAMRAFNGLYKTLFLSRRGFAQLTSQGLRGKELMQALWKVHRDDFAMGRGSALSECFCEFKL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00162 351 Pfam GDP-fucose protein O-fucosyltransferase 1 295 IPR019378 -
Pumo7g00162 351 CDD O-FucT_plant 1 301 IPR024709 -
Pumo7g00162 351 PIRSF UCP009360 1 349 IPR024709 -
Pumo7g00162 351 PANTHER OS02G0726500 PROTEIN-RELATED 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00162 Pumo-Chr7 1859217 1862311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00162 1 321 Miscellaneous Gene Families AT1G22460 34.535 1.36e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00162 - - gmx:100801207 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00162 7 1859217 1862311 Pumo7g00162 7 1859217 1862311 ECH