Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00154 ATGGCTTTGGCACGTTTGGCTTTGAAAAACTTGCAACAAAGGGTGTGTGGTTCCTCCTTCTTGATTGGCCATGGTGGTGGTGTGCACAAGCAGAGGTGGAACAATGAGTTGCTCAAAAGGTTTGCTACTGCAGCCGGGGACAAGGGAAAATCTGAAGTAGCTGTCACAGAAGGGAAAAAGTCTAATAGGTTGTTCCCAAGGAGGAGGGGCAGAAGATGGGTTTGGAGAAACGATGATGGTGACTTCCCTCCTGCTCTTTATGAATTCTTTCCTTCAGGGCTCGGGAGTGCACTGATGCAGGCAAGTGAGAACATCAACAGGCTGTTTGAGAACATGAATTTGACACCTTGGTCTCTGAGTGGGCGTGTGAAGGAGAGGGATGACCATTACAAACTGCGGTACGAGATGCCGGGGATCACGAAAGAGGACGTGGAGATCACCATTGATGATGGGGTGTTAACAATAAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGTGATGATGATGAGCATTGGTCATCAAGTAGCTATGGATACTATAACACAAGCCTGGTTTTGCCTGATGATGCCAAGGCTGACGACATTAAGGCAGAGTTGAAGGATGGTGTCCTAACTGTAACCATTCCTAGGACTCAGAAGCCCAAAAAGGATGTCAAACAAGTCACAGTACAATGA 675 0.4726 MALARLALKNLQQRVCGSSFLIGHGGGVHKQRWNNELLKRFATAAGDKGKSEVAVTEGKKSNRLFPRRRGRRWVWRNDDGDFPPALYEFFPSGLGSALMQASENINRLFENMNLTPWSLSGRVKERDDHYKLRYEMPGITKEDVEITIDDGVLTIKGEHKEEKEEGDDDEHWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTQKPKKDVKQVTVQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00154 224 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 108 224 IPR002068 -
Pumo7g00154 224 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 37 224 IPR044587 GO:0009408
Pumo7g00154 224 MobiDBLite consensus disorder prediction 155 172 - -
Pumo7g00154 224 Pfam Hsp20/alpha crystallin family 123 224 IPR002068 -
Pumo7g00154 224 CDD ACD_sHsps-like 123 210 - -
Pumo7g00154 224 Gene3D - 92 224 IPR008978 -
Pumo7g00154 224 MobiDBLite consensus disorder prediction 155 174 - -
Pumo7g00154 224 SUPERFAMILY HSP20-like chaperones 109 223 IPR008978 -
Pumo7g00154 224 FunFam 26.5 kDa heat shock protein, mitochondrial 87 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00154 Pumo-Chr7 1801017 1802018 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00154 K13993 - gmx:100787482 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00154 7 1801017 1802018 Pumo7g00154 7 1801017 1802018 ECH