Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00144 ATGGCTCTCATCACATCCCAACCTAAAAACCCCATTCTCCATCGCTTCACCACTCTTCACCGCCCACTTCCACGGTTAGATAGAACCGTTCTCGGTCTTGGCTCCTTCTCTCACAATGCTGTGCCCATTAAAAATTTTAACTTTAACCCAAAGCAAAGCAAAATTTCCCTCAAAAACAACCCCTTTGCCTATAATTTGGCCGTGACAGCCAAAGCCAAGGCCAATGCTGCATTTGGAGGAGGAGAAGGTTTGGAGGCAGAGGAGGGGACATTGAAACACAGAAAGATTTTGTTGTCTGAGGTTGAGGTGAAGAGAGAGAGGAGTGTTTTCTTTGGGAGGAAATGGAACTCTTTGGATGTTGGCACTGCTGGAATTGTGTTGGCCATGCATGCCCTTTGCCTCTTTGCTCCATTCCATTTCAATTGGCCAGCTTTTTGGGTGGCTGTGGCTCTCTATATTCTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCATAGGAACCTTTCTCACAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTTCTTTGCCTACTGTGGGGTTCTGGCTCTTCAGGGGAACCCAATTGATTGGGTGAGCACACATAGGTACCATCACCAGTTTTGTGATTCTGAGAGAGACCCTCATAGCCCCACTGAAGGATTCTGGTTCAGTCATATGAGTTGGCTATTTGATAGCAATTCTGTCATAGAAAGGTGTGGAGAGGCAAACAATGTTGGTGACTTGGAGAAACAATCCTTCTATAGATTTCTCCGAAGCACTTACCTTGTCCATCCTTTTGCTTTGGGAGCCCTTCTATATGCAGCAGGAGGATTTCCTTTCCTTGTCTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTGAACTCAGCTTGCCATGTCTGGGGGAATCAGGCATGGAACACCAGGGACTTATCCAGAAATAATTGGTGGGTGGCGTTGCCTGCATTTGGTGAGGGTTGGCACAATAACCACCATGCTTTTGAGTACTCAGCTAGACATGGACTAGAGTGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGACGTCAAGTTACCCACCGAGAGTCACAAGCAGAAAATGGCATTCAATAGTGATGCAATAGCCACATGA 1179 0.4631 MALITSQPKNPILHRFTTLHRPLPRLDRTVLGLGSFSHNAVPIKNFNFNPKQSKISLKNNPFAYNLAVTAKAKANAAFGGGEGLEAEEGTLKHRKILLSEVEVKRERSVFFGRKWNSLDVGTAGIVLAMHALCLFAPFHFNWPAFWVAVALYILTGLFGITLSFHRNLSHRSFKLPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDSNSVIERCGEANNVGDLEKQSFYRFLRSTYLVHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALPAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATDVKLPTESHKQKMAFNSDAIAT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00144 392 PANTHER ACYL-COA DESATURASE 93 385 IPR015876 GO:0016717
Pumo7g00144 392 PRINTS Fatty acid desaturase family 1 signature 287 308 IPR015876 GO:0016717
Pumo7g00144 392 PRINTS Fatty acid desaturase family 1 signature 202 231 IPR015876 GO:0016717
Pumo7g00144 392 PRINTS Fatty acid desaturase family 1 signature 330 344 IPR015876 GO:0016717
Pumo7g00144 392 PRINTS Fatty acid desaturase family 1 signature 165 185 IPR015876 GO:0016717
Pumo7g00144 392 Pfam Fatty acid desaturase 142 361 IPR005804 GO:0006629
Pumo7g00144 392 CDD Delta9-FADS-like 142 373 IPR015876 GO:0016717
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00144 86 388 Lipid Metabolism Gene Families AT3G15850 74.671 5.22e-173 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00144 K20416 - gmx:100786391 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00144 7 1716150 1717790 Pumo7g00144 7 1716150 1717790 ECH