Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00133 ATGCCCCCAAGATCAGGAAAAGGGAAATCAAATAAAGCAAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGCAGCAGCACCTTCTCTTGTTGACATCACTGTGGTCACTCCATATGACACAGAGATTGTCTTGAAGGGTATCTCTACCGATAAGATACTTGATGTAAGAAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTGTCTCATGAGGCCAAAGGGCAGAGATTAAATGACAGAGTGGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACACAGAGGAAGTCCAAGCAATTGCGCAGGTGCGGAGGGTGTTGGACATTGTGGCCTGCACAACAAGGTTCAGTAGGCCTAAACGCAGCGTATCAAGCCCAGAATCAAAGCCCAAGAAAAACGGAAAGGCCCAACATCAGAACAAGACGAGTTTGAGCCCACCGGGGACACCGAATGGAGAATCCCGGGTCGGGTCGGCGATCTCGGAGAACGTGGGGATGAAGGCCATTCACCCGACGCCGAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTCTCTCACCTCTCTCCCCCGATTTTACAATTGAAGAGATGTGAAGTGAAGGATGAAGAGGATAGGCGCAAGGGAGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTGGTTGGTTCAGAGAAAGGGTTTTACACAGTTGGAAAGCAGTCTCTGCACAGCCACACCTTGGTTGATCTACTTCAACAGCTTAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCTTATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTCGCTGAGTCTCCTTCAAACTTTCTTGCATTACCTGCTGAAGATGAAAACTGGGGTGGTAATGGTGGTGGCCAAGGAAGAAATGGTGAATTTGATCTTAGACCATGGGCAGCAGATTTTGCAATATTGGCCTCTCTTCCTTGCAAAACTGAGGAGGAGAGGGTAGTTAGAGATAGAAAAGCATTTCTGCTTCACAGTCAATTCGTTGATACCTCAATATTTAAGGCTGTTGCGGCTATACAACAAGTCATGGAATCCAAGTCAAATACCAAGAATGAATTGAATTCTTCTCCAGGTTCTATTCTGCATGAAGATCACGTGGGAGACTTATCCATTATAGTCTACCGCGATATCCAGGATGGAAATACAAAGTGTGATTCTATACTGGATGAATCTAGAATGCATAAGGGGGATGCTCAGAAGAATTTAATCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTTCATGATACTTCTTCCTTGGCTGTCGTTGTTGTACACCACTGTGGGTATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCTAAAGTTCGAGATATTGAGATAGATGATCAGCCAGATGGAGGAGCAAATACTCTCAACATTAACAGTTTGAGGCTACTGCTTCACAAGTCTGGAGCTGAGTCATTACAAGGGACACTATCATCCCTATCAAATTCGGATGACTTAGATGCTTCTAAACATCGTGTTCGGAAGGTGGTTCAAGAATGCATGGAAAAGATAAAGGAGAAGCCAAGTGTTTCAGAAAGGTCTATTCGATGGGAACTTGGTTCCTGTTGGATGCAGCATTTGCAAAAACAGGAAACTTCGACAGATAACAGTTCCAAAAACAAAGAAGATGGCAATGATGTTGAGCAAACTGTTAGAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAGAAGAGAGAAGAAATCAAATAATCTAGATGGTGCAGATTCTAGGGAGCAAAATGACTCTAGACCTGCAAACGTGAATGATGATGTTGCTGATAAAGTTGAGCCAAACAATGATGACTTAAGTAACTCTAATGAATTAGAGAAACTACTTTCTGAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGATCTTCACACGAAGTCAGTGGATGAGCTTATCAGCATGGCACACAAGTTTTATGATGATGTTGCCTTGCCAAAGCTGGCTATGGACTTTGGATCACTTGAACTTTCTCCAGTCGATGGTCGTACACTGACTGACTTTATGCATTTAAGAGGATTACAGATGCGAGCTTTGGGTAAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGATCACTCGAGCTTTCAAGCATCTACTTAAAGCAGTTATTGCCTCTGTTGACAATGTAGCTGATCTATCTGCAGCCATTGCATCAACACTGAATTTCTTACTTGGTGGGTGTAGAACAGAAGATGCCAACCAAAGTTTGAGTGATGATCATAATCTCAGAATTCAATGGTTACGTTTGTTTTTGTCCAAAAGATTTGGGTGGACACTAAATGATGAATTTCAACATTTGAGGAAGTTGTCGATTCTCAGAGGGCTCTGTCACAAGGTTGGATTGGAAATTTTCCCAAGAGATTATGACATGGAGTCCAGTAAGCCCTTTGGGAAAAATGATATTATCAGCCTCGTTCCTGTTTGCAAGGAACAAATTTTTTTACAGCATGTAGGGTGCTCCTCAATAGATGGACGCAATTTATTGGAGTCTTCCAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTAGCTAAGATGATGGCTGTTTGTGGACCCTATCATCGAAATACTGCAAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAACCAGGCCACCATCTATCAGCAAAAGGCCTTGGATATAAATGAGAGAGAGCTTGGGCTTGACCACCCTGACACTATGAAAAGCTATGGGGATCTTTCTGTCTTTTATTATCGTCTGCAACACATTGAGTTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTCCATTTCACATGTGGGCTGTCTCATCCAAACACAGCAGCAACTTATATAAATGTGGCCATGATGGAAGAGGCCATGGGAAATGTTCATGTGGCACTCAGATACTTACATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGCATGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGACCAGAAGACCTTCGTACACAGGATGCTGCCGCATGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATTAGTCCCGACCCAAAAGGAAACGATGCTCGGAGGAAACAAAGGCGTGCAAAGATACTCCCAACAAGTGATAACAACAGCCAAGAACATGACGATGCAATAGCTGATGAGAGCATTCTTTTTGATAACTCAAAAGATGCTCCAAGTATGGTAGAAGGCAAAATAGAAGAAACAAATGGCACACTTGATTCTCAAGTACCGAAAGAAAATGGTGATTTCACTAGATACAGGCCAGTGACAAGTGAACCTGTTTATGAGGCATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGGTCAGGAAATGCTGCTAACCGCAAGTTTGGACACAGAAAGCGACCTCATCTATCAAAGCTCAGCATTTACAGGGAAGGCAGTTCTAGGAATGACATTACTTCGCCGCCACAAAGAGGAGTTCCAAAAGTCATGTTAGACATGTCATCTCCATCTAGACAACCAAAATCTCGAAACTTAACTTTGAATGAGGATTCTGTTTGTCATCCAACAAAAGCTTCTGTGTCCAAAACTGCATCTCCGGCATCTCTAAGTTCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTTTAGCACCACCAGGAACTGTTTTAAAGCCATTGTTGGAAAAGGCTGAGATGGACAAGGTTAATGCTGAAGATGAGACAGCTGTGACATCAATAAATGAAGGTACCTGCCAAAGTTCCATAACCAATACAGTTTCTCAGCATGATGAAACAGAGGAAACTCATGAAATTGAACCTCAACAAGAAAGTTCTGGATCGGAACTTGAGAAGGTTTCCCTTGCTTCTGATCAAACAAAACCTACAGAAACAAATGGCAGTAAGCTTTCAGCTGCAGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGTGTCCTTCACAAACATGTATGATACAGATGTTAGTCAAGGCATGCACGTGGAGCCAGTGCTTCCCCCTGCTGTTGCTAGGGTCCCTTGTGGGCCTCGATCACCTCTATATTATAGAACCAACCATACTTTTCGCATGAAACATGGTTTTACTAAAAGTCAAACCCCTACCAGAGAAAGAAGTGAATTTGGGTCTCCAAGGATAATGAATCCACATGCACCTGAGTTTGTTCCCAGAAGTGCTTCTCAAATAGAAGCCAATGATGCCAATTCAAATGTTGCCAATGAGCAAGAAAAAAATAAGGTAGATGAAAATTTTGTTGAAATCAATAACAGTTCCACAAAAAACAGTATTTCTGAATCTGAGAAGTCCGAGATAGCAAGGCAGATATTGCTCAGTTTTCTAGTGAAATCTGTCAAGGAAAATATTGATTCTGTGGATGAATCTAAGGATGGTGAAGGGAAAATTGAGAACTTGGAAAGTTGTTCTGATAAAATAGCCAAAGACAGTGCTGTCATAAACATTATGTATGGAAATGAAGAAAAGAATAAGACAGTGCCTCATTCCAGTAATAGTGATGAGCAAGAGAAATTAGGTGTTACTGAAAAAAAGAATGGAGATGGAGAAGGGTTTATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAGATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTGA 5067 0.4162 MPPRSGKGKSNKAKAEKKKKEEKAAAAPSLVDITVVTPYDTEIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEAKGQRLNDRVEVVTLKPCLLRMVEEDYTEEVQAIAQVRRVLDIVACTTRFSRPKRSVSSPESKPKKNGKAQHQNKTSLSPPGTPNGESRVGSAISENVGMKAIHPTPKLSDFYEFFSFSHLSPPILQLKRCEVKDEEDRRKGDYFQLQVKICNGKVIEVVGSEKGFYTVGKQSLHSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSNFLALPAEDENWGGNGGGQGRNGEFDLRPWAADFAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKAVAAIQQVMESKSNTKNELNSSPGSILHEDHVGDLSIIVYRDIQDGNTKCDSILDESRMHKGDAQKNLIKGLTADESVIVHDTSSLAVVVVHHCGYTATVKVVGNVNMRKPKVRDIEIDDQPDGGANTLNINSLRLLLHKSGAESLQGTLSSLSNSDDLDASKHRVRKVVQECMEKIKEKPSVSERSIRWELGSCWMQHLQKQETSTDNSSKNKEDGNDVEQTVRGLGKQFKFLKRREKKSNNLDGADSREQNDSRPANVNDDVADKVEPNNDDLSNSNELEKLLSEEAFLRLKESGTDLHTKSVDELISMAHKFYDDVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLQMRALGKVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVDNVADLSAAIASTLNFLLGGCRTEDANQSLSDDHNLRIQWLRLFLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLEIFPRDYDMESSKPFGKNDIISLVPVCKEQIFLQHVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEAMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSMQHEQTTLKILQAKLGPEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDPKGNDARRKQRRAKILPTSDNNSQEHDDAIADESILFDNSKDAPSMVEGKIEETNGTLDSQVPKENGDFTRYRPVTSEPVYEASSDEGWQEANSKGRSGNAANRKFGHRKRPHLSKLSIYREGSSRNDITSPPQRGVPKVMLDMSSPSRQPKSRNLTLNEDSVCHPTKASVSKTASPASLSSLASKSISYKEVALAPPGTVLKPLLEKAEMDKVNAEDETAVTSINEGTCQSSITNTVSQHDETEETHEIEPQQESSGSELEKVSLASDQTKPTETNGSKLSAAAKPFNPGMLSMSHHLNSVSFTNMYDTDVSQGMHVEPVLPPAVARVPCGPRSPLYYRTNHTFRMKHGFTKSQTPTRERSEFGSPRIMNPHAPEFVPRSASQIEANDANSNVANEQEKNKVDENFVEINNSSTKNSISESEKSEIARQILLSFLVKSVKENIDSVDESKDGEGKIENLESCSDKIAKDSAVINIMYGNEEKNKTVPHSSNSDEQEKLGVTEKKNGDGEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 614 646 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1141 1173 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 584 598 - -
Pumo7g00133 1688 SUPERFAMILY Hypothetical protein c14orf129, hspc210 218 284 IPR023231 -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1402 1428 - -
Pumo7g00133 1688 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 883 1133 - -
Pumo7g00133 1688 SUPERFAMILY TPR-like 965 1089 IPR011990 GO:0005515
Pumo7g00133 1688 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 7 1517 IPR027523 GO:0006996
Pumo7g00133 1688 Pfam Translation initiation factor eIF3 subunit 135 709 851 IPR033646 -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1196 1324 - -
Pumo7g00133 1688 SUPERFAMILY TPR-like 894 997 IPR011990 GO:0005515
Pumo7g00133 1688 CDD CLU-central 711 852 IPR033646 -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1146 1160 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1291 1324 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 148 168 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1386 1401 - -
Pumo7g00133 1688 Gene3D Tetratricopeptide repeat domain 1001 1130 IPR011990 GO:0005515
Pumo7g00133 1688 Gene3D Tetratricopeptide repeat domain 887 1000 IPR011990 GO:0005515
Pumo7g00133 1688 Pfam Mitochondrial function, CLU-N-term 50 121 IPR028275 -
Pumo7g00133 1688 Pfam Tetratricopeptide repeat 1011 1085 - -
Pumo7g00133 1688 Pfam Tetratricopeptide repeat 927 997 - -
Pumo7g00133 1688 ProSiteProfiles TPR repeat profile. 928 961 IPR019734 GO:0005515
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1632 1655 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1371 1385 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1626 1655 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1371 1430 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 614 655 - -
Pumo7g00133 1688 SMART tpr_5 970 1003 IPR019734 GO:0005515
Pumo7g00133 1688 SMART tpr_5 928 961 IPR019734 GO:0005515
Pumo7g00133 1688 SMART tpr_5 1012 1045 IPR019734 GO:0005515
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 130 168 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 577 598 - -
Pumo7g00133 1688 MobiDBLite consensus disorder prediction 1 25 - -
Pumo7g00133 1688 ProSiteProfiles Clueless (Clu) domain profile. 315 587 IPR025697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00133 Pumo-Chr7 1617694 1629912 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00133 K03255 - gmx:100784276 2945.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00133 7 1617694 1629912 Pumo7g00133 7 1617694 1629912 ECH