Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00128 ATGGGGGGAGCGTGTTCTAGGAAGCAAGAGCCGGACTGTGAAGATAGTCTTACCAGAGGACTATCACGAAGATATTGCAAATGCGGGAGTTTGAAATGGTGGACATCCTCTTTTTCTTATCCATCTGTAGATTTTCACTTACGAAAAGGAGAATGTCCATCACTGTTGGACTTGTGCATACAGAAAATAAACGAGGATATTGATAAATATAACACATTTTCTATGCTACCACGAGATATAAGTCAGCTAATTTTCAATAATTTGGTTTACTCCCGACGTCTAACCAGTGCTCACCTTGAGGCTTTTCGAGATTGTGCTCTCCAGGATCTTTACTTGGGAGAATATGATGGTGTTAATGATAATTGGATGGGCGTCATCTCATCCCAGGGTTCATCTTTACTTTCTGTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACATACCTTAAAGATTGTGAAAGTCTCATTTCCTTAAATCTAAATTATTGTGACCAAATTTCAGATTGTGGACTAGAGTGTATCAGTGGTCTGTCAAACTTGACAAGTTTGAGTTTCAGACGAAATGATTCAATCTCTGCTCAAGGAATGAGTGCCTTTTCCGGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCCGGGATTCATGGAGGCCTTGTTCATCTTCGAGGTTTGACCAAGTTGGAATCTCTCAATTTAAAGTGGTGTAATTGCATAACAGATTATGATATGAAACCTCTTTCAGAGCTTGCAAGCCTGAAAAGTCTAGAGATTTCTTCCAGTAAAGTCACTGATTCTGGCATCAGTTTTCTAAAAGGGTTACAGAAGCTTGCCCTTTTAAATTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGTAATCTCTCTGACAATGGATGCAAAAAATTTTCACGACTGGAAAATTTGAAAGTATTAAACTTGGGATTTAATGTCATAACAGATGCATGTTTAGTTCACTTGAAAGGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGTGATGAAGGATTGGTCAATTTGGCTGGCCATAAGCAATTGAACTGCTTGGAATTGTCCGATACAGAAGTTGGAAGCAATGGGCTACACCATTTATCAGGTTTGTCTAGTCTGCAGAAAATAAATCTGTCTTTTACCATGATTAGTGATAGTAGTTTAAGGAAATTGTGCGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTTACCAAATTACTGATGATGGGCTGGCAAACCTTACAAGTTTGACTGCCCTCACTGACCTGGATTTGTTTGGTGCACGAATCACAGATTTTGGGACAAACTATTTGAAAAAATTTAAGAACCTGAGGTCCTTGGAAATATGCGGTGGAGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAACTTTCTTCTCTAGTGTGCTTAAATTTATCGCAAAACAGCAACCTTACAGACAAAACCCTGGAGTTAATTTCTGGGCTTACTGGGTTGGTTTCTTTGAATGTTTCAAATTCTCGTATCACCAATGCTGGACTGCAGCATTTGAAAACACTGAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACAGCAAATGACATCAAGAAACTGAAATCAATATACCTCCCGAATCTGTGTGGTTTTGGCCTTCCACCAAATGAGTTGCTCCAGAACTCTGGCATGATGTGA 1767 0.3967 MGGACSRKQEPDCEDSLTRGLSRRYCKCGSLKWWTSSFSYPSVDFHLRKGECPSLLDLCIQKINEDIDKYNTFSMLPRDISQLIFNNLVYSRRLTSAHLEAFRDCALQDLYLGEYDGVNDNWMGVISSQGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYCDQISDCGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDSGISFLKGLQKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKFSRLENLKVLNLGFNVITDACLVHLKGLTKLESLNLDSCKIGDEGLVNLAGHKQLNCLELSDTEVGSNGLHHLSGLSSLQKINLSFTMISDSSLRKLCGLSSLKSLNLDAYQITDDGLANLTSLTALTDLDLFGARITDFGTNYLKKFKNLRSLEICGGGLTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSIYLPNLCGFGLPPNELLQNSGMM 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00128 588 Gene3D Ribonuclease Inhibitor 399 479 IPR032675 -
Pumo7g00128 588 Gene3D Ribonuclease Inhibitor 480 571 IPR032675 -
Pumo7g00128 588 Gene3D Ribonuclease Inhibitor 220 294 IPR032675 -
Pumo7g00128 588 Gene3D Ribonuclease Inhibitor 125 219 IPR032675 -
Pumo7g00128 588 SUPERFAMILY RNI-like 274 567 - -
Pumo7g00128 588 Pfam Leucine Rich repeat 229 250 IPR001611 GO:0005515
Pumo7g00128 588 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Pumo7g00128 588 Pfam Leucine Rich repeat 255 274 IPR001611 GO:0005515
Pumo7g00128 588 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Pumo7g00128 588 FunFam Leucine-rich repeat family protein 220 298 - -
Pumo7g00128 588 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Pumo7g00128 588 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Pumo7g00128 588 FunFam F-box/LRR-repeat protein 14 299 382 - -
Pumo7g00128 588 SMART LRR_CC_2 518 542 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 349 373 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 421 445 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 228 253 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 469 493 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 154 179 IPR006553 -
Pumo7g00128 588 SMART LRR_CC_2 301 325 IPR006553 -
Pumo7g00128 588 Gene3D Ribonuclease Inhibitor 300 398 IPR032675 -
Pumo7g00128 588 SUPERFAMILY RNI-like 80 370 - -
Pumo7g00128 588 FunFam Leucine-rich repeat family protein 474 573 - -
Pumo7g00128 588 FunFam Predicted protein 118 219 - -
Pumo7g00128 588 PANTHER UNCHARACTERIZED 44 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00128 Pumo-Chr7 1550107 1561104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00128 99 504 Receptor kinase-like Gene Family AT1G75820 25.107 7.42e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00128 - - gmx:100795219 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00128 7 1550107 1561104 Pumo7g00128 7 1550107 1561104 ECH