Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00112 ATGGCCCTTGTTCTCCGTCTTGGAAGCAGAAGCAAAGGGAAGCACCTTTCTTCTTCTTCTTCTTCTTCTCATATCGTGTTCTTCTCCACCTCCGATTCCAATTCCAATTCCAACTCTCCCTTCTCTTCCCTTTTCAAAGATATCAAGGACAATCTCAAACAACCGTCTTCCTCAAACTCCCAACGAGCTTCGGCCGACCTGATCCATAAAAACCTCAACGAATTCCGCGCCCGGACCACCGCGCCTCCCCCCGGGGAGCAGCAAATCTCGTTCCAGCAACTCTACCACCAAAACATGCACCGCAACCCCCCCAACTCCCTCGACATCAATGCCATTCGCAAGAGCCTGCAGAACAGCAAGCCCGCCGGGACCGCCCAAACCTCCTCCCGCCTGTTGCGCCCGGACTCCTTTTTCGGGAAGGAAGTGACCAGAGACGGCGGCTCGCCACCCTCCTCGTCGTCGATGTCGACGGCGTTCTTGAGGACTTACAGCATGGAGGATTTGGGGGAGAAATTGAGGATGCTGAGGCCCGAGGGAATGCGAAAGGAGTGGTTTTCTGTGAGGGAGTTGAGTGAGAGGTTGGGGAGGTTGAGGAAGATGGAGGAGGAGGAGCAAGCCCGTTCCACCCGAGAAGTTGAAGTCTTTCAGGATTTGAGAGTAGTGCTCGTTGGTCTCCATAAAAGTGAAACTGACACCGCTGAGAAAGCTTCACGGCAGGGACTTAGTATATTGAGCCACTTGAGTGGGACTCCAATCTTCTCTCTTGGCCCTCCTAAACCCCATCTTGTTCAAAAGTACTTTCATCCGGATAATATGTCCTCCGCCGACAAGTTGAAAATTGAGCTTGCCAAGGTTAGAGATGAGTTTAAAATGTCAGAGTCCGATTGCGGTTCTGCGCGTGTTCAAATTGCACAACTAACAACAAAGATTAAGCATCTATCAGCAGTTCTACACAAGAAGGATGTTCATTCTCGTAAAGGTTTGCTAGCAATGGTTCAGAGGAGAAAAAGATTACTGAAATACCTCAGAAGAACTGATTGGGATTCCTATTGTTTTGTTATCTCCAAGCTGGGTCTACGTGATAATCCCGATCATAGTTATAAAACTCGATCTGGTATGGTGGCATAG 1128 0.4965 MALVLRLGSRSKGKHLSSSSSSSHIVFFSTSDSNSNSNSPFSSLFKDIKDNLKQPSSSNSQRASADLIHKNLNEFRARTTAPPPGEQQISFQQLYHQNMHRNPPNSLDINAIRKSLQNSKPAGTAQTSSRLLRPDSFFGKEVTRDGGSPPSSSSMSTAFLRTYSMEDLGEKLRMLRPEGMRKEWFSVRELSERLGRLRKMEEEEQARSTREVEVFQDLRVVLVGLHKSETDTAEKASRQGLSILSHLSGTPIFSLGPPKPHLVQKYFHPDNMSSADKLKIELAKVRDEFKMSESDCGSARVQIAQLTTKIKHLSAVLHKKDVHSRKGLLAMVQRRKRLLKYLRRTDWDSYCFVISKLGLRDNPDHSYKTRSGMVA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00112 375 PANTHER S15/NS1, RNA-BINDING PROTEIN 15 366 - -
Pumo7g00112 375 Coils Coil 275 295 - -
Pumo7g00112 375 Hamap 30S ribosomal protein S15 [rpsO]. 272 361 IPR005290 GO:0003735|GO:0005840|GO:0006412
Pumo7g00112 375 MobiDBLite consensus disorder prediction 118 157 - -
Pumo7g00112 375 Coils Coil 187 207 - -
Pumo7g00112 375 Gene3D - 278 325 - -
Pumo7g00112 375 CDD Ribosomal_S15p_S13e 284 358 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pumo7g00112 375 Gene3D - 327 362 - -
Pumo7g00112 375 Pfam Ribosomal protein S15 284 360 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pumo7g00112 375 MobiDBLite consensus disorder prediction 118 133 - -
Pumo7g00112 375 SUPERFAMILY S15/NS1 RNA-binding domain 282 361 IPR009068 -
Pumo7g00112 375 SMART Ribosomal_S15_2 282 360 IPR000589 GO:0003735|GO:0005840|GO:0006412
Pumo7g00112 375 NCBIfam 30S ribosomal protein S15 283 360 IPR005290 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00112 - - gmx:100820600 470.7