Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00110 ATGATGTCAGTGAAAGATTTTCCAGAAGAATGCTGGGAATTGGTCTTCAGATTCATTGGCCATGGTCGTCATTTGGAGTCTCTATCTTTGGTTTGCAAGCAGTTCCTTTCCATCACAAACCGGCTTCAATTCTCTCTCACAATATATGATCCAACCATTCCACTCCTTCCTCGGCTACTCCTGAGGTTTCCAAGGCTCAAAATCTTAGACCTCAGTCACTTGAATGGCCACAATGAAGGCTTGCTTCATCAAATCTCACAATCCGAGTTGGACCTTGATTTGCTTAATCTATCCAACCAGAGAACACTTCCTGTTGATGGCTTAAGAGATATTGGCTCAAACATGAAAATTTTGAGGGTGCTGATCTGCTCAAACATTGCCTCTCTTCGTGATAGCCATCTGGTAGTCATAGCTTATTGTTTCCCATTTCTTGAAGAGCTTGACATAAGCTTCCCATTGGATTCTCAAGCATCTGATTTTGGGGTGCTAAGGATGTCTTCCATGCTTGAGAATCTTCGCAAGATTAATATTTCTGGTAATTACTTGATCACTGATAAATCCTTGTTCTCTCTATGCCAAAACTGTTTGTCATTGGAAGAGATTTCATTCTTCACCTGTTTTAAGATCACTCAAATAGGCATTGCCTCTGCGATCCGCCTCAGACCCGGTTTGAATTCCATTTCCTTTAACATTGAAAAGAAAAGAATACATGGACCTGGTTTAACACTCACTCCCATTGACTTAGATTTGATTGATTCATTCAGGAGTTTGAAAAGGTTAACTGCTATTGATTTGTCAAATTCTGTTATCTCGGATGAGTTTCTCTTTGCGGTTGCAGAAGGTGGTGGTCATCTGCTAAAGAAGCTTATCCTCCAAGACTGTTGCAATTGCACATTTTCAGGAATCTCTTATGTGTTGTCCAAATGCCAATCTGTTCAATGCTTGGATCTTCGGAAAGCTGATTTTTTAACTGATCAATGTATCAGCAAGTTATCTGTATTTCTTCTTAGCTTAACTTCTATAAACCTGAGTGGTTGTTGCCAGCTGACCAATTCAACATTTTTCATACTCACAAGAAACTGTCCTTTGCTCAGTGAGATCAGAATGGAGAGGACATATCTTGGGGTGGAAGGGGAAGAAGATTCAATGCCAGATTCTTTTGTCAACCTTGAAGTGAAAGCAGTTTATTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTTTGATAAAATTTGTTTCCGTTTGCCCCAGTTTGCAGCTTCTTGACTTAACCGGTTGTGAGGGTGTTTCTGGTGAAGGTATTGTTGAGGTGTTAAAGAGATGCTGTGAGATAAGGCATTTGAACCTGGCCTATACAGGAATGGAAGTGTTTGAGATAGACTTTGAAGTTTCCCAACTAGAGGTGTTGAACTTGTCAGGGTCAAGAATTGAGGATGAAGCACTCTCAATAATCTCAAGGAGGTGTAGTGGACTACTACTTTTGGACATCCAGAGTTGCTGGCATGTTACTCCAAAGGGTGTAGGGGAAGTTGTAGAAAACTGCAAGGCATTGAAAGAGTTGAATCTAAAGAATTGTAGGTTGGTGAGCGATGATTTTGTTGCTTGGGTTGAGTTTTCAAGACCGTCATTGAGACCAATAACAACACCTTCTGATGTTGGTGCTTATTGTTGA 1671 0.4051 MMSVKDFPEECWELVFRFIGHGRHLESLSLVCKQFLSITNRLQFSLTIYDPTIPLLPRLLLRFPRLKILDLSHLNGHNEGLLHQISQSELDLDLLNLSNQRTLPVDGLRDIGSNMKILRVLICSNIASLRDSHLVVIAYCFPFLEELDISFPLDSQASDFGVLRMSSMLENLRKINISGNYLITDKSLFSLCQNCLSLEEISFFTCFKITQIGIASAIRLRPGLNSISFNIEKKRIHGPGLTLTPIDLDLIDSFRSLKRLTAIDLSNSVISDEFLFAVAEGGGHLLKKLILQDCCNCTFSGISYVLSKCQSVQCLDLRKADFLTDQCISKLSVFLLSLTSINLSGCCQLTNSTFFILTRNCPLLSEIRMERTYLGVEGEEDSMPDSFVNLEVKAVYLGDNVLLSDASLIKFVSVCPSLQLLDLTGCEGVSGEGIVEVLKRCCEIRHLNLAYTGMEVFEIDFEVSQLEVLNLSGSRIEDEALSIISRRCSGLLLLDIQSCWHVTPKGVGEVVENCKALKELNLKNCRLVSDDFVAWVEFSRPSLRPITTPSDVGAYC 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00110 556 Gene3D Ribonuclease Inhibitor 232 376 IPR032675 -
Pumo7g00110 556 Gene3D Ribonuclease Inhibitor 383 455 IPR032675 -
Pumo7g00110 556 Gene3D Ribonuclease Inhibitor 456 547 IPR032675 -
Pumo7g00110 556 FunFam F-box/LRR-repeat protein 20 461 548 - -
Pumo7g00110 556 PANTHER UNCHARACTERIZED 309 532 - -
Pumo7g00110 556 FunFam F-box/LRR-repeat protein 4 139 234 - -
Pumo7g00110 556 SUPERFAMILY RNI-like 296 543 - -
Pumo7g00110 556 Gene3D - 3 40 - -
Pumo7g00110 556 SMART LRR_CC_2 488 513 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 463 487 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 335 360 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 195 220 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 169 194 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 514 541 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 257 281 IPR006553 -
Pumo7g00110 556 SMART LRR_CC_2 415 440 IPR006553 -
Pumo7g00110 556 FunFam F-box/LRR-repeat protein 4 240 375 - -
Pumo7g00110 556 Pfam Leucine Rich repeat 415 435 IPR001611 GO:0005515
Pumo7g00110 556 SUPERFAMILY RNI-like 50 375 - -
Pumo7g00110 556 Gene3D Ribonuclease Inhibitor 138 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00110 Pumo-Chr7 1287579 1289422 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00110 K10268 - gmx:100811565 982.63